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07M_4_2014_scaffold_9724

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_9724_1

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comp(172..591)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE143
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:KKR10313.1}; TaxID=1618813 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
nitrogen-fixing NifU domain-containing protein
07M_4_2014_scaffold_9724_2
GWB1_OD1_43_8, Parcubacteria, Bacteria

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comp(579..1742)
DNA (1164bp) protein (388aa)
Cysteine desulfurase {ECO:0000313|EMBL:KKT20174.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
Cysteine desulfurase id=1921048 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
cysteine desulfurase NifS
07M_4_2014_scaffold_9724_3
unknown

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1782..1961
DNA (180bp) protein (60aa)

This feature has no annotations

07M_4_2014_scaffold_9724_trna_1
unknown

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comp(1810..1881)
DNA (72bp)
transferRNA Thr
07M_4_2014_scaffold_9724_4
unknown

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comp(1884..2306)
DNA (423bp) protein (141aa)

This feature has no annotations

07M_4_2014_scaffold_9724_5

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comp(2290..2748)
DNA (459bp) protein (153aa)
Elongation factor Ts {ECO:0000313|EMBL:KKR60036.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
Elongation factor Ts id=2074380 bin=GWE2_CPR3_35_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
tsf; translation elongation factor Ts
07M_4_2014_scaffold_9724_6
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


comp(2745..3464)
DNA (720bp) protein (240aa)
30S ribosomal protein S2 n=1 Tax=uncultured bacterium RepID=K1Z3T0_9BACT
30S ribosomal protein S2P
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_9724_7
R_RIF_OD1_13_59_16, RIF-OD1-13, Parcubacteria, Bacteria

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comp(3519..4532)
DNA (1014bp) protein (338aa)
seg 222..233 id=84303 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_59_16_curated
07M_4_2014_scaffold_9724_8
RLO_RIF_OD1_13_41_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(4647..5012)
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_13_41_11_curated
07M_4_2014_scaffold_9724_9
unknown

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5129..5680
DNA (552bp) protein (184aa)

This feature has no annotations

07M_4_2014_scaffold_9724_10
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

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comp(6080..6307)
DNA (228bp) protein (76aa)
Hypothetical conserved protein id=2720598 bin=GWA1_ZB2_49_26 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
YcfA family protein
Tax=RIFOXYD1_FULL_OD1_48_21_curated
07M_4_2014_scaffold_9724_11
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(6304..6552)
DNA (249bp) protein (83aa)
UPF0150 protein AF_1072 id=2720602 bin=GWA1_ZB2_49_26 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_9724_12
RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(6731..7591)
DNA (861bp) protein (287aa)
Endosialidase chaperone n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0C7G3_9DELT
Tax=RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated
Displaying 13 items

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