ggKbase home page

07M_4_2014_scaffold_4549

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_4549_1
R_RIF_OD1_11_44_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1..714
DNA (714bp) protein (238aa)
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC id=5803006 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
beta-lactamase domain protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_11_44_35_curated
07M_4_2014_scaffold_4549_2
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

801..1649
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR89050.1}; TaxID=1619006 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
hypothetical protein id=15190091 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
phosphohydrolase
07M_4_2014_scaffold_4549_3
Chlorobium phaeovibrioides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

1651..2166
DNA (516bp) protein (172aa)
Transcription elongation factor GreA n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=GREA_PROVI
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000255|HAMAP-Rule:MF_00105}; TaxID=290318 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme; subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides; (strain DSM 265)).;"
07M_4_2014_scaffold_4549_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

2126..2557
DNA (432bp) protein (144aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=53687 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ndk; nucleoside diphosphate kinase
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
07M_4_2014_scaffold_4549_5
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists

2835..3278
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR80958.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
seg id=5803014 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
07M_4_2014_scaffold_4549_6
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

3265..4656
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361F12D
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:KKS15770.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
RNA-metabolising metallo-beta-lactamase
07M_4_2014_scaffold_4549_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

4665..5240
DNA (576bp) protein (192aa)
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_4549_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5245..6414
DNA (1170bp) protein (390aa)
Aromatic amino acid permease id=1947704 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
aromatic amino acid permease
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
07M_4_2014_scaffold_4549_9
R_OD1_42_9, Parcubacteria, Bacteria

Not on your lists

6433..7665
DNA (1233bp) protein (411aa)
PHP domain protein id=4424984 bin=GWC2_OP3_44_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
DNA and RNA helicase
Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_curated
07M_4_2014_scaffold_4549_10
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


comp(7893..8237)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWM2_9BACT
rplT; 50S ribosomal protein L20
Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
07M_4_2014_scaffold_4549_11
RIFOXYC2_FULL_RIF_OD1_09_47_9_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


comp(8239..8427)
DNA (189bp) protein (63aa)
Ribosomal protein L35 id=5227325 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYC2_FULL_RIF_OD1_09_47_9_curated
Displaying 11 items

View Taxonomy