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07M_4_2014_scaffold_5038

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_5038_1
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(3..539)
DNA (537bp) protein (179aa)
Elongation factor P id=3544225 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
translation elongation factor P
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
07M_4_2014_scaffold_5038_2
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(545..1021)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037210A2
Tax=RBG_13_RIF_OD1_07_36_15_curated
07M_4_2014_scaffold_5038_3
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(1018..1317)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003625EAF
PadR family transcriptional regulator
Tax=CG_CPR10_01
07M_4_2014_scaffold_5038_4
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

1372..2475
DNA (1104bp) protein (368aa)
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037530C8 rbh
Tax=CG_CPR10_03
07M_4_2014_scaffold_5038_5

Not on your lists

2736..2990
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003625EAF
Marine sediment metagenome DNA, contig: S06H3_L02385 {ECO:0000313|EMBL:GAI16577.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
07M_4_2014_scaffold_5038_6
unknown

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comp(3021..3473)
DNA (453bp) protein (151aa)

This feature has no annotations

07M_4_2014_scaffold_5038_7
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(3641..4168)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037BC507
AMMECR1 domain-containing protein
Tax=CG_CPR10_01
07M_4_2014_scaffold_5038_8
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4165..4848)
DNA (684bp) protein (228aa)
UgpQ; glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] id=14426215 bin=bin1_lowGC species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
glpQ; putative glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Tax=RBG_16_Desulfobacca_58_9_curated
07M_4_2014_scaffold_5038_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4860..5099)
DNA (240bp) protein (80aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
07M_4_2014_scaffold_5038_10
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(5209..6012)
DNA (804bp) protein (268aa)
Radical SAM domain protein n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LJ47_9FIRM id=130017 bin=ACD7 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Radical SAM domain protein
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
07M_4_2014_scaffold_5038_11
unknown

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comp(6132..6215)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 11 items

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