ggKbase home page

07M_4_2014_scaffold_5514

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_5514_1
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
mutM; Formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] id=5084615 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
formamidopyrimidine-DNA glycosylase
Tax=CG_CPR10_03
07M_4_2014_scaffold_5514_2

Not on your lists

comp(659..823)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003622DB7
Marine sediment metagenome DNA, contig: S06H3_S12291 {ECO:0000313|EMBL:GAI44906.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
yclJ2; putative transcriptional regulatory protein YclJ
07M_4_2014_scaffold_5514_3
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(828..1184)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036C15E0
two component transcriptional regulator, winged helix family
Tax=CG_CPR10_03
07M_4_2014_scaffold_5514_4

Not on your lists

comp(1282..3612)
DNA (2331bp) protein (777aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CF78F
Uncharacterized protein {ECO:0000313|EMBL:KKN97103.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
multi-sensor signal transduction histidine kinase
07M_4_2014_scaffold_5514_5
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(3661..4605)
DNA (945bp) protein (315aa)
DNA polymerase I (EC:2.7.7.7)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E28E1
Tax=RBG_13_RIF_OD1_07_42_11_curated
07M_4_2014_scaffold_5514_6
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(4598..5050)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003737F3B
hypothetical protein
Tax=CG_CPR10_01
07M_4_2014_scaffold_5514_7
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

5086..5790
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D32EB
type II secretion system protein E
Tax=CG_CPR10_01
07M_4_2014_scaffold_5514_8
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

5729..6127
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D32EB
type II secretion system protein E
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
07M_4_2014_scaffold_5514_9
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

6406..7137
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003661309
hypothetical protein
Tax=CG_CPR10_01
07M_4_2014_scaffold_5514_10
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

7134..7868
DNA (735bp) protein (245aa)
Tax=CG_CPR10_01
07M_4_2014_scaffold_5514_11
unknown

Not on your lists

8001..8096
DNA (96bp) protein (32aa)

This feature has no annotations

07M_4_2014_scaffold_5514_12
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(8211..9392)
DNA (1182bp) protein (394aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=14424037 bin=bin11_novelCP species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=bin11_novelCP organism_group=Unknown_CP rbh
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tax=CG_CPR10_03
07M_4_2014_scaffold_5514_13
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

9422..11329
DNA (1908bp) protein (636aa)
Penicillin-binding protein, 1A family id=2966203 bin=GWA1_ZB2_49_26 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=CG_CPR10_01
07M_4_2014_scaffold_5514_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(11499..11720)
DNA (222bp) protein (74aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
07M_4_2014_scaffold_5514_15
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

comp(11707..11964)
DNA (258bp) protein (86aa)
Tax=CG_CPR03_02
07M_4_2014_scaffold_5514_16
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12237..12740)
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
Displaying 16 items

View Taxonomy