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07M_4_2014_scaffold_5873

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_5873_1

Not on your lists

comp(3..998)
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO02866.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
N-6 DNA methylase id=15191803 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
N-6 DNA Methylase family protein
07M_4_2014_scaffold_5873_2
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(1008..1649)
DNA (642bp) protein (214aa)
transcriptional repressor, LexA family; K01356 repressor LexA [EC:3.4.21.88] id=3822 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11 rbh
transcriptional regulator, XRE family (EC:3.4.21.88)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
07M_4_2014_scaffold_5873_3

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comp(1719..2849)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B903A
Recombination factor protein RarA {ECO:0000313|EMBL:KKQ97074.1}; TaxID=1618921 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_39_11.;"
AAA ATPase central domain protein
07M_4_2014_scaffold_5873_4
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(2853..3383)
DNA (531bp) protein (177aa)
transcription elongation factor GreA; K03624 transcription elongation factor GreA id=14423777 bin=bin11_novelCP species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=bin11_novelCP organism_group=Unknown_CP
greA; transcription elongation factor GreA
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
07M_4_2014_scaffold_5873_5
R_OD1_40_28, Parcubacteria, Bacteria

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3494..3916
DNA (423bp) protein (141aa)
heat shock protein HSP20; K13993 HSP20 family protein id=134048 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
heat shock protein Hsp20
Tax=RIFCSPLOWO2_01_FULL_OD1_40_28_curated
07M_4_2014_scaffold_5873_6
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(3928..4221)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CWL1_9BACT
hypothetical protein
Tax=CG_CPR10_03
07M_4_2014_scaffold_5873_7

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comp(4193..4486)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z192_METPS
Marine sediment metagenome DNA, contig: S03H2_C02680 {ECO:0000313|EMBL:GAH30426.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
07M_4_2014_scaffold_5873_8
unknown

Not on your lists

comp(4491..5054)
DNA (564bp) protein (188aa)

This feature has no annotations

07M_4_2014_scaffold_5873_9
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5073..5333)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QU21_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR36711.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
07M_4_2014_scaffold_5873_10
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5346..5924)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SXG0_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE25324.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
07M_4_2014_scaffold_5873_11
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(5947..6165)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
07M_4_2014_scaffold_5873_12
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(6269..7174)
DNA (906bp) protein (302aa)
hypothetical protein id=5801639 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Tax=CG_CPR04_01
07M_4_2014_scaffold_5873_13
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(7292..7975)
DNA (684bp) protein (228aa)
Haloacid dehalogenase, IB family protein n=1 Tax=uncultured bacterium RepID=K2EYQ6_9BACT
HAD-superfamily subfamily IB hydrolase, TIGR01490
Tax=CG_CPR10_03
07M_4_2014_scaffold_5873_14
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(8100..8591)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003668FDF
hypothetical protein
Tax=CG_CPR10_01
07M_4_2014_scaffold_5873_15
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(8640..9530)
DNA (891bp) protein (297aa)
Urea transporter; K08717 urea transporter id=5097765 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
urea transporter
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
07M_4_2014_scaffold_5873_16
unknown

Not on your lists

comp(9527..9613)
DNA (87bp) protein (29aa)

This feature has no annotations

Displaying 16 items

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