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07M_4_2014_scaffold_7927

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_7927_1
unknown

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1..333
DNA (333bp) protein (111aa)

This feature has no annotations

07M_4_2014_scaffold_7927_2
GWB1_OD1_45_9_partial, Giovannonibacteria, Parcubacteria, Bacteria

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388..642
DNA (255bp) protein (85aa)
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKU16190.1}; TaxID=1618653 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_45_9b.;"
RNA polymerase, sigma-24 subunit, ECF subfamily id=4731799 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RNA polymerase sigma-70
07M_4_2014_scaffold_7927_3
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1136..1618
DNA (483bp) protein (161aa)
hypothetical protein id=17617 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
07M_4_2014_scaffold_7927_4
unknown

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comp(1589..1684)
DNA (96bp) protein (32aa)

This feature has no annotations

07M_4_2014_scaffold_7927_5
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

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1932..2369
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR88801.1}; TaxID=1619006 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
id=4731800 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
07M_4_2014_scaffold_7927_6
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2366..3559
DNA (1194bp) protein (398aa)
hypothetical protein id=5801293 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
07M_4_2014_scaffold_7927_7
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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4201..5187
DNA (987bp) protein (329aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=15190297 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
07M_4_2014_scaffold_7927_8
RHI_OD1_Yanofskybacteria_45_19b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5373..5924
DNA (552bp) protein (184aa)
Efflux transporter, RND family, MFP subunit (Fragment) id=4731802 bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RND family efflux transporter MFP subunit
Tax=RIFCSPHIGHO2_12_FULL_OD1_Yanofskybacteria_45_19b_curated
07M_4_2014_scaffold_7927_9
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

6083..6658
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B2W7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
07M_4_2014_scaffold_7927_10
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6648..7358
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHZ1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR98818.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
hypothetical protein
07M_4_2014_scaffold_7927_11
CG_CPR05_01, CG_CPR05, Bacteria

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7446..8165
DNA (720bp) protein (240aa)
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=5802131 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
ABC transporter, ATP-binding protein
Tax=CG_CPR05_01
07M_4_2014_scaffold_7927_12
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

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8119..8331
DNA (213bp) protein (71aa)
sulfate-transporting ATPase; K09687 antibiotic transport system ATP-binding protein id=5048656 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ABC transporter-like protein
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_7927_13
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

8342..9085
DNA (744bp) protein (248aa)
multidrug ABC transporter permease; K09686 antibiotic transport system permease protein id=5802130 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
ABC-2 type transporter rbh
Tax=RBG_13_RIF_OD1_07_37_56_curated
07M_4_2014_scaffold_7927_14
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

9389..9811
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW21966.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Predicted protein id=1916096 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Displaying 14 items

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