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07M_4_2014_scaffold_1560

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_1560_1
unknown

Not on your lists

comp(514..657)
DNA (144bp) protein (48aa)

This feature has no annotations

07M_4_2014_scaffold_1560_2
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

1076..2233
DNA (1158bp) protein (386aa)
two-component sensor histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3] id=133114 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
PAS domain S-box
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_3
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

2238..3044
DNA (807bp) protein (269aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A1C0A
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_4
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3013..4860)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036284F2
Hedgehog/intein hint domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
07M_4_2014_scaffold_1560_5
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4951..6210)
DNA (1260bp) protein (420aa)
rrs:RoseRS_0168 aminotransferase, class V; K04487 cysteine desulfurase [EC:2.8.1.7] id=73580 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
cysteine desulfurase NifS (EC:2.8.1.7)
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_6
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

6274..7899
DNA (1626bp) protein (542aa)
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=uncultured bacterium RepID=K2F4C4_9BACT
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_7
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

7896..8837
DNA (942bp) protein (314aa)
Putative anaerobic sulfite reductase, A subunit id=2107930 bin=GWD2_CPR2_39_7 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_8
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

8806..9603
DNA (798bp) protein (266aa)
Oxidoreductase FAD/NAD(P)-binding domain protein id=2357323 bin=GWD1_TM7_39_7 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_9
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

9605..10369
DNA (765bp) protein (255aa)
NADH ubiquinone oxidoreductase, 20 Kd subunit family id=2107934 bin=GWD2_CPR2_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hydrogenase subunit delta
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_10
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

10356..11594
DNA (1239bp) protein (413aa)
Coenzyme F420-reducing hydrogenase, alpha subunit n=1 Tax=uncultured bacterium RepID=K1XCV0_9BACT
coenzyme F420-reducing hydrogenase subunit alpha
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_11
unknown

Not on your lists

comp(11611..12288)
DNA (678bp) protein (226aa)

This feature has no annotations

07M_4_2014_scaffold_1560_12
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(12249..13139)
DNA (891bp) protein (297aa)
hypothetical protein id=5048722 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Pacearch_04
07M_4_2014_scaffold_1560_13
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13144..13347)
DNA (204bp) protein (68aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XJQ1_CALS8
hydrogenase assembly chaperone hypC/hupF
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_14
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

13383..13553
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_1560_15
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

13676..14572
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000366A8E5
hypothetical protein
Tax=CG_CPR03_03
07M_4_2014_scaffold_1560_16
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

14572..14847
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380714F
hypothetical protein
Tax=RBG_13_RIF_OD1_07_36_15_curated
Displaying 16 items

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