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07M_4_2014_scaffold_9565

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
07M_4_2014_scaffold_9565_1
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(3..446)
DNA (444bp) protein (148aa)
transmembrane_regions 71..88 id=133068 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_9565_2
R_SM2F11_43_13, SM2F11, Bacteria

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comp(585..1844)
DNA (1260bp) protein (420aa)
peptidase M16 domain protein id=133628 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
07M_4_2014_scaffold_9565_3
R_OD1_Wolfebacteria_47_17b, Wolfebacteria, Parcubacteria, Bacteria

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comp(2000..2695)
DNA (696bp) protein (232aa)
id=1968278 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_47_17b_curated
07M_4_2014_scaffold_9565_trna_1
unknown

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comp(2758..2829)
DNA (72bp)
transferRNA Glu
07M_4_2014_scaffold_9565_4
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2934..3149
DNA (216bp) protein (72aa)
30S ribosomal protein S15 n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=RS15_CALS8
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000255|HAMAP-Rule:MF_01343}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
07M_4_2014_scaffold_9565_5
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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3149..3658
DNA (510bp) protein (170aa)
conserved hypothetical protein (DUF88) id=15189995 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
07M_4_2014_scaffold_9565_6
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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3665..4087
DNA (423bp) protein (141aa)
gwc:GWCH70_1161 polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=133865 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
polynucleotide phosphorylase
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
Displaying 7 items

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