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bjp_ig2599_scaffold_1995

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_1995_1
Pseudomonas sp. BRH_c35, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153..1016)
DNA (864bp) protein (288aa)
Nitrate/sulfonate/bicarbonate ABC transporter ATPase n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CF78_PSEST
Sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJS26809.1}; TaxID=1629711 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sou
nitrate/sulfonate/bicarbonate ABC transporter ATPase
bjp_ig2599_scaffold_1995_2
Parcubacteria bacterium GW2011_GWF1_52_5, Parcubacteria, Bacteria

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comp(997..1764)
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QRU2_9BRAD
Putative ABC transporter permease protein {ECO:0000313|EMBL:KKW27048.1}; TaxID=1618959 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_52_5.;"
ABC transporter permease
bjp_ig2599_scaffold_1995_3

Not on your lists

comp(1764..2774)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YGM3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD36412.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NMT1/THI5 like domain-containing protein
bjp_ig2599_scaffold_1995_4
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

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3022..3768
DNA (747bp) protein (249aa)
Transcriptional regulator, TrmB n=1 Tax=uncultured bacterium RepID=K1XGN2_9BACT
transcriptional regulator TrmB Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
Transcriptional regulator, TrmB
bjp_ig2599_scaffold_1995_5
CG_CPR10_01, CG_CPR10, Bacteria

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3800..4822
DNA (1023bp) protein (341aa)
Ribosome-binding ATPase YchF n=1 Tax=uncultured bacterium RepID=K2G5N0_9BACT
gtp-binding protein ychf; K06942 Tax=CG_CPR10_01
GTP-binding protein YchF
bjp_ig2599_scaffold_1995_6
CG_Elusi_05, Elusimicrobia, Bacteria

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4827..7112
DNA (2286bp) protein (762aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037F0DCC
hypothetical protein Tax=CG_Elusi_05
hypothetical protein
bjp_ig2599_scaffold_1995_7

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7135..8187
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D6E2A
Uncharacterized protein {ECO:0000313|EMBL:KKS36722.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
bjp_ig2599_scaffold_1995_8
CG_CPR10_02, CG_CPR10, Bacteria

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8195..8662
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000382B162
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=CG_CPR10_02
bjp_ig2599_scaffold_1995_9
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

8789..9256
DNA (468bp) protein (156aa)
single-stranded DNA-binding protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003754173
ssb-3; single-strand binding protein; K03111 single-strand DNA-binding protein Tax=CG_CPR10_01
ssb; single-strand-binding protein
bjp_ig2599_scaffold_1995_10
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(9703..10752)
DNA (1050bp) protein (350aa)
recombinase RecA n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036C84F8
recA; multifunctional SOS repair factor Tax=CG_CPR10_01
protein recA
bjp_ig2599_scaffold_1995_11
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(10758..11018)
DNA (261bp) protein (87aa)
Cytotoxic translational repressor n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D589_PELTS
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
RelE; cytotoxic translational repressor
bjp_ig2599_scaffold_1995_12
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(11027..11281)
DNA (255bp) protein (85aa)
AbrB family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
Transcriptional regulator, AbrB family id=1987531 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
bjp_ig2599_scaffold_1995_13
R_OD1_Kaiserbacteria_55_20, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11437..12162)
DNA (726bp) protein (242aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_20_curated
bjp_ig2599_scaffold_1995_14
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(12247..12747)
DNA (501bp) protein (167aa)
hypothetical protein Tax=GWA2_OD1_45_21
bjp_ig2599_scaffold_1995_15
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(12744..12947)
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
bjp_ig2599_scaffold_1995_16
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(13433..13609)
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
Uncharacterized protein id=4870068 bin=GWA2_CPR4_42_17 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
bjp_ig2599_scaffold_1995_17

Not on your lists

comp(14290..14613)
DNA (324bp) protein (108aa)
Marine sediment metagenome DNA, contig: S06H3_L05177 {ECO:0000313|EMBL:GAI02723.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNP-1 like RNA-binding protein
Displaying 17 items

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