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bjp_ig2599_scaffold_10062

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2599_scaffold_10062_1
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(250..789)
DNA (540bp) protein (180aa)
hypothetical protein Tax=RBG_13_RIF_OD1_07_37_56_curated
protein of unknown function DUF88 id=131653 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
bjp_ig2599_scaffold_10062_2

Not on your lists

comp(1082..1726)
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT92254.1}; TaxID=1618832 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_45_14.;"
seg 43..53 id=86489 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
bjp_ig2599_scaffold_10062_3
unknown

Not on your lists

comp(1723..1983)
DNA (261bp) protein (87aa)

This feature has no annotations

bjp_ig2599_scaffold_10062_trna_1
unknown

Not on your lists

2362..2432
DNA (71bp)
transferRNA
bjp_ig2599_scaffold_10062_4
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2435..3133
DNA (699bp) protein (233aa)
type II restriction enzyme TaqI (EC:3.1.21.4) Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
Type II site-specific deoxyribonuclease n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A9M3_THEAQ
type II restriction enzyme TthHB8I
bjp_ig2599_scaffold_10062_5
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3125..4648)
DNA (1524bp) protein (508aa)
hpaIM; Modification methylase HpaI Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
BstYI methyltransferase id=2026715 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hpaIM; Modification methylase HpaI
bjp_ig2599_scaffold_10062_6
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4750..5391
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036312C9
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:ADP76496.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacill
bjp_ig2599_scaffold_10062_7
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(5663..6103)
DNA (441bp) protein (147aa)
ssDNA-binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ssb; single-stranded DNA-binding protein
bjp_ig2599_scaffold_10062_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists


comp(6108..6563)
DNA (456bp) protein (152aa)
30S ribosomal protein S6 Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
30S ribosomal protein S6 id=4790087 bin=GWC2_OD1_43_27 species=Helicobacter bizzozeronii genus=Helicobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
bjp_ig2599_scaffold_10062_9
unknown

Not on your lists

8377..8487
DNA (111bp) protein (37aa)

This feature has no annotations

bjp_ig2599_scaffold_10062_10
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(10295..10675)
DNA (381bp) protein (127aa)
fibronectin type III domain-containing protein Tax=RBG_13_RIF_OD1_08_40_8_curated
fibronectin, type III domain-containing protein id=17136 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
fibronectin type III domain-containing protein
bjp_ig2599_scaffold_10062_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(10767..11396)
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=2201938 bin=GWB2_CP_45_9 species=Bacteroides ovatus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
bjp_ig2599_scaffold_10062_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11345..11674)
DNA (330bp) protein (110aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Putative uncharacterized protein id=4447213 bin=GWC2_Planctomycete_KSU_39_26 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
bjp_ig2599_scaffold_10062_13
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11816..12241)
DNA (426bp) protein (142aa)
HEPN domain-containing protein id=130472 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Putative uncharacterized protein Tax=GWE1_OD1_ACD7_35_17
HEPN domain-containing protein
bjp_ig2599_scaffold_10062_14
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(12225..12389)
DNA (165bp) protein (55aa)
DNA polymerase beta subunit id=130488 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=CG_CPR01_01
Displaying 15 items

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