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bjp_ig3402_scaffold_5812

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5812_1
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

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25..519
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
hypothetical protein; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
prepilin-type N-terminal cleavage/methylation domain-containing protein
bjp_ig3402_scaffold_5812_2
GWB1_OD1_43_8, Parcubacteria, Bacteria

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576..1304
DNA (729bp) protein (243aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=GWB1_OD1_43_8
Prepilin peptidase-1 id=5227292 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
peptidase A24A domain-containing protein
bjp_ig3402_scaffold_5812_3
R_SM2F11_52_17, SM2F11, Bacteria

Not on your lists

1301..1852
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_01_SM2F11_52_17_curated
id=3594481 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
bjp_ig3402_scaffold_5812_4
GWB1_OD1_43_8, Parcubacteria, Bacteria

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1856..2404
DNA (549bp) protein (183aa)
seg id=5803073 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=GWB1_OD1_43_8
bjp_ig3402_scaffold_5812_5
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

2406..2894
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT19181.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
seg id=5803074 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig3402_scaffold_5812_6
GWB1_OD1_43_8, Parcubacteria, Bacteria

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2891..3403
DNA (513bp) protein (171aa)
seg id=5803072 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=GWB1_OD1_43_8
bjp_ig3402_scaffold_5812_7

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3391..5445
DNA (2055bp) protein (685aa)
DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=5803071 bin=OD1_GWC2_34_28 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
NAD-dependent DNA ligase (EC:6.5.1.2)
Ligase protein {ECO:0000313|EMBL:KKR60258.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
bjp_ig3402_scaffold_5812_8
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

5442..5903
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3L5_DESTD
Uncharacterized protein {ECO:0000313|EMBL:KKT18787.1}; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
hypothetical protein
bjp_ig3402_scaffold_5812_9
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

5905..6267
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E67FD
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
bjp_ig3402_scaffold_5812_10
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

6264..6536
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003645555
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKT18785.1}; Flags: Fragment;; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
bjp_ig3402_scaffold_5812_11
R_OD1_42_9, Parcubacteria, Bacteria

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6529..7572
DNA (1044bp) protein (348aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_01_FULL_OD1_42_9_cur
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=GATA_THEYD
bjp_ig3402_scaffold_5812_12
Parcubacteria bacterium GW2011_GWB2_40_8, Parcubacteria, Bacteria

Not on your lists

7550..8125
DNA (576bp) protein (192aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR74490.1}; TaxID=1618890 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB2_40_8.;"
transmembrane_regions id=5803066 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
bjp_ig3402_scaffold_5812_trna_4
unknown

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comp(8133..8207)
DNA (75bp)
transferRNA
bjp_ig3402_scaffold_5812_trna_3
unknown

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comp(8210..8282)
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_5812_13
unknown

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comp(8505..8924)
DNA (420bp) protein (140aa)

This feature has no annotations

bjp_ig3402_scaffold_5812_trna_1
unknown

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9515..9587
DNA (73bp)
transferRNA
bjp_ig3402_scaffold_5812_trna_2
unknown

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9596..9667
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_5812_14
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(9793..11244)
DNA (1452bp) protein (484aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 id=2720182 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
pbpG; D-alanyl-D-alanine endopeptidase
bjp_ig3402_scaffold_5812_15
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

11315..12556
DNA (1242bp) protein (414aa)
Membrane protein related to metalloendopeptidase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FFL8_9BURK
peptidase M23B Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
membrane protein related to metalloendopeptidases
bjp_ig3402_scaffold_5812_16
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

12576..13349
DNA (774bp) protein (258aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 id=5803707 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
prfB; protein release subunit factor B
bjp_ig3402_scaffold_5812_17
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

13403..13678
DNA (276bp) protein (92aa)
S23 ribosomal protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E8K0_FLESM
S23 ribosomal protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
S23 ribosomal protein
bjp_ig3402_scaffold_5812_18
RBG_13_OD1_48_8_curated, Parcubacteria, Bacteria

Not on your lists

13650..13850
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Pseudomonas nitroreducens RepID=UPI0002E9C065
Protein of unknown function (DUF1653). Tax=RBG_13_OD1_48_8_curated
hypothetical protein
bjp_ig3402_scaffold_5812_19
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

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13917..14597
DNA (681bp) protein (227aa)
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein id=5227277 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cell division ATP-binding protein FtsE
bjp_ig3402_scaffold_5812_20
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

14594..15253
DNA (660bp) protein (220aa)
hypothetical protein; K09811 cell division transport system permease protein Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
cell division protein; K09811 cell division transport system permease protein id=5803703 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein FtsX
Displaying 24 items

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