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bjp_ig3402_scaffold_15174

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_15174_1
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists

comp(3..608)
DNA (606bp) protein (202aa)
hypothetical protein; K07491 putative transposase Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
Transposase id=4901177 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
bjp_ig3402_scaffold_15174_2
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(792..3398)
DNA (2607bp) protein (869aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT21017.1}; Flags: Fragment;; TaxID=1618874 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8.;"
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
srpA; platelet-binding glycoprotein
bjp_ig3402_scaffold_15174_3
R_OD1_41_19, Parcubacteria, Bacteria

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comp(4358..4969)
DNA (612bp) protein (204aa)
id=3634406 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
bjp_ig3402_scaffold_15174_4
Parcubacteria bacterium GW2011_GWD2_40_9, Parcubacteria, Bacteria

Not on your lists


7058..8053
DNA (996bp) protein (332aa)
Protein RecA {ECO:0000313|EMBL:KKR80424.1}; TaxID=1618943 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_40_9.;"
protein recA; K03553 recombination protein RecA id=5803301 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
recA protein
bjp_ig3402_scaffold_15174_5
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(8034..8675)
DNA (642bp) protein (214aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
Transposase id=2882195 bin=GWF2_OP3_43_52 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
bjp_ig3402_scaffold_15174_6
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(8829..9227)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11472.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
bjp_ig3402_scaffold_15174_7
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

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comp(9212..9781)
DNA (570bp) protein (190aa)
sigma-70 family RNA polymerase sigma factor Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
RNA polymerase, sigma-24 subunit, ECF subfamily protein id=3736405 bin=GWC2_OD1_43_27 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ECF subfamily RNA polymerase sigma-24 factor
bjp_ig3402_scaffold_15174_8
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

comp(9809..11269)
DNA (1461bp) protein (487aa)
fibronectin type III protein
seg Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
seg id=5801819 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
bjp_ig3402_scaffold_15174_9
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(11238..11810)
DNA (573bp) protein (191aa)
S23 ribosomal protein Tax=GWB1_OD1_41_6_partial
seg id=5801820 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Displaying 9 items

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