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bjp_ig3402_scaffold_2430

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_2430_1
GWA1_OP11_47_16, Amesbacteria, Microgenomates, Bacteria

Not on your lists

1..234
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU63811.1}; TaxID=1618353 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_47_16.;"
bjp_ig3402_scaffold_2430_2
Microgenomates bacterium GW2011_GWC1_43_11, Microgenomates, Bacteria

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321..662
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9EKP4_9GAMM id=5087321 bin=GWF1_OP11_31_35_complete species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Uncharacterized protein {ECO:0000313|EMBL:KKS90247.1}; Flags: Fragment;; TaxID=1618520 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_43_11.;"
bjp_ig3402_scaffold_2430_3
R_RIF_OD1_12_45_11c, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

766..1374
DNA (609bp) protein (203aa)
transmembrane protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_12_45_11c_curated
Peptidase M50 id=1797410 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptidase M50
bjp_ig3402_scaffold_2430_4
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

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1755..2177
DNA (423bp) protein (141aa)
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RBG_13_RIF_OD1_08_41_18_curated
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=2821 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
30S ribosomal protein S12
bjp_ig3402_scaffold_2430_5
GWA1_OD1_47_11, Parcubacteria, Bacteria

Not on your lists


2392..2865
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFC2_THET1
30S ribosomal protein S7 Tax=GWA1_OD1_47_11
30S ribosomal protein S7
bjp_ig3402_scaffold_2430_6
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

3034..5148
DNA (2115bp) protein (705aa)
toc:Toce_0116 translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor EF-G [EC:3.6.5.3] id=2672 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
fusA; elongation factor G; K02355 elongation factor G Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
fusA; elongation factor G
bjp_ig3402_scaffold_2430_7
unknown

Not on your lists

5288..5548
DNA (261bp) protein (87aa)

This feature has no annotations

bjp_ig3402_scaffold_2430_8
RIFOXYD1_FULL_RIF_OD1_10_39_35_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

5730..7094
DNA (1365bp) protein (455aa)
methyltransferase (EC:2.1.1.-) Tax=RIFOXYD1_FULL_RIF_OD1_10_39_35_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036DEA67 rbh
M4C-methyltransferase
bjp_ig3402_scaffold_2430_9
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

7104..7715
DNA (612bp) protein (204aa)
HNH endonuclease domain protein n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HQB8_CAMUP
HNH endonuclease domain-containing protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
HNH endonuclease domain-containing protein
bjp_ig3402_scaffold_2430_10
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

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7728..7898
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI00037B237B
hypothetical protein Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
bjp_ig3402_scaffold_2430_11
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

8665..9864
DNA (1200bp) protein (400aa)
Elongation factor Tu n=1 Tax=uncultured bacterium RepID=K2E086_9BACT
translation elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
translation elongation factor Tu
bjp_ig3402_scaffold_2430_12
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


9894..10262
DNA (369bp) protein (123aa)
30S ribosomal protein S10 n=1 Tax=uncultured bacterium RepID=K2FLV9_9BACT
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
rpsJ; 30S ribosomal protein S10
bjp_ig3402_scaffold_2430_13
R_OD1_46_26, Microgenomates, Bacteria

Not on your lists


10472..11092
DNA (621bp) protein (207aa)
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_01_FULL_OD1_46_26_curated
50S ribosomal protein L3 id=2824344 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L3
bjp_ig3402_scaffold_2430_14
GWA2_OD1_45_90, Azambacteria, Parcubacteria, Bacteria

Not on your lists


11140..11730
DNA (591bp) protein (197aa)
50S ribosomal protein L4 n=1 Tax=Clostridium sp. CAG:440 RepID=R7GDS2_9CLOT
50S ribosomal protein L4 {ECO:0000313|EMBL:KKU19035.1}; TaxID=1618614 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_45_90.;"
rplD; 50S ribosomal protein L4
bjp_ig3402_scaffold_2430_15
RHI_RIF_OD1_06_38_11, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


11869..12246
DNA (378bp) protein (126aa)
50S ribosomal protein L23 n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0C3_9CLOT id=2770 bin=ACD11 species=[Clostridium] hiranonis genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_06_38_11_curated
50S ribosomal protein L25
bjp_ig3402_scaffold_2430_16
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


12342..13166
DNA (825bp) protein (275aa)
50S ribosomal protein L2 Tax=GWA2_OD1_39_41
gmc:GY4MC1_0113 ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=8868 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i rbh
rplB; 50S ribosomal protein L2
bjp_ig3402_scaffold_2430_17
GWA2_OD1_41_22_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


13254..13613
DNA (360bp) protein (120aa)
30S ribosomal protein S19 {ECO:0000313|EMBL:KKS01546.1}; TaxID=1619023 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_41_22.;"
Ribosomal protein S19 id=2154530 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rpsS; ribosomal protein S19 (BS19)
bjp_ig3402_scaffold_2430_18
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


13706..14098
DNA (393bp) protein (131aa)
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
50S ribosomal protein L22 id=2824330 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplV; 50S ribosomal protein L22
bjp_ig3402_scaffold_2430_19
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists


14185..14847
DNA (663bp) protein (221aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GU79_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:KKS69592.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
30S ribosomal protein S3
bjp_ig3402_scaffold_2430_20

Not on your lists


15112..15522
DNA (411bp) protein (137aa)
50S ribosomal protein L16 {ECO:0000313|EMBL:KKR02919.1}; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
50S ribosomal protein L16 id=3736635 bin=GWC2_OD1_43_27 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
LSU ribosomal protein L16P
bjp_ig3402_scaffold_2430_21
CG_CPR13_01, CG_CPR13, Bacteria

Not on your lists


15619..15828
DNA (210bp) protein (70aa)
50S ribosomal protein L29 Tax=CG_CPR13_01
bjp_ig3402_scaffold_2430_22
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


15859..16146
DNA (288bp) protein (96aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
30S ribosomal protein S17 id=3423286 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
30S ribosomal protein S17
bjp_ig3402_scaffold_2430_23
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


16219..16587
DNA (369bp) protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=2653 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
rplN; 50S ribosomal protein L14
bjp_ig3402_scaffold_2430_24
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists


16682..16990
DNA (309bp) protein (103aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=GWA1_OD1_49_17_curated
rplX; 50S ribosomal protein L24
bjp_ig3402_scaffold_2430_25
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


17077..17619
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=2 Tax=Thermoanaerobacter RepID=D3T4P3_THEIA
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Ther
bjp_ig3402_scaffold_2430_26
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


18086..18478
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA51_THEID
30S ribosomal protein S8 {ECO:0000313|EMBL:KKR72691.1}; TaxID=1618482 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
30S ribosomal protein S8
bjp_ig3402_scaffold_2430_27
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

Not on your lists


18561..19109
DNA (549bp) protein (183aa)
50S ribosomal protein L6 id=2824236 bin=GWC1_OD1_38_17 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L6 {ECO:0000313|EMBL:KKQ42293.1}; TaxID=1618948 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
50S ribosomal protein L6
bjp_ig3402_scaffold_2430_28
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


19201..19599
DNA (399bp) protein (133aa)
50S ribosomal protein L18, partial n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F56E2
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_13_RIF_OD1_07_36_15_curated
rplR; 50S ribosomal protein L18
bjp_ig3402_scaffold_2430_29
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists


19681..20229
DNA (549bp) protein (183aa)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
30S ribosomal protein S5 id=1797351 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsE; ribosomal protein S5
bjp_ig3402_scaffold_2430_30
RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


20311..20733
DNA (423bp) protein (141aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFOXYB1_FULL_OD1_Moranbacteria_44_23_curated
50S ribosomal protein L15 id=2824223 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
50S ribosomal protein L15
Displaying items 1-30 of 36 in total

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