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bjp_ig3402_scaffold_5048

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5048_1

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1..129
DNA (129bp) protein (43aa)
Marine sediment metagenome DNA, contig: S03H2_L02880 {ECO:0000313|EMBL:GAH34585.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
bjp_ig3402_scaffold_5048_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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355..618
DNA (264bp) protein (88aa)
molecular chaperone GroES n=1 Tax=Anaeromusa acidaminophila RepID=UPI00036A8834
molecular chaperone GroES; K04078 chaperonin GroES Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
groES; co-chaperonin GroES
bjp_ig3402_scaffold_5048_3
R_OD1_41_19, Parcubacteria, Bacteria

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865..2517
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037AA744
chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
chaperonin GroEL
bjp_ig3402_scaffold_5048_4
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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2830..3525
DNA (696bp) protein (232aa)
pseudouridine synthase Rsu; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=uncultured bacterium RepID=K2F426_9BACT
bjp_ig3402_scaffold_5048_5
GWA1_OD1_36_12, Parcubacteria, Bacteria

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4000..4338
DNA (339bp) protein (113aa)
RNP-1 like RNA-binding protein Tax=GWA1_OD1_36_12
Glycine-rich RNA-binding protein GRP1A id=3012495 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNP-1 like RNA-binding protein
bjp_ig3402_scaffold_5048_6
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

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4885..5202
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS15845.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
bjp_ig3402_scaffold_5048_7
GWF2_OD1_36_839, Moranbacteria, Parcubacteria, Bacteria

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5733..6758
DNA (1026bp) protein (342aa)
Monooxygenase, FAD-binding:FAD dependent oxidoreductase {ECO:0000313|EMBL:KKQ17544.1}; TaxID=1618723 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_36_
dehydrogenase (flavoproteins) id=8004 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
flavin-dependent dehydrogenase
bjp_ig3402_scaffold_5048_8
GWE1_OD1_38_31, Falkowbacteria, Parcubacteria, Bacteria

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7011..7361
DNA (351bp) protein (117aa)
id=1987411 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ69715.1}; TaxID=1618638 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWE1_38_31.;"
bjp_ig3402_scaffold_5048_9
GWC2_OD1_39_14, Parcubacteria, Bacteria

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7430..8413
DNA (984bp) protein (328aa)
Translation initiation factor eIF-2B subunit 2 Tax=GWC2_OD1_39_14
Putative Ribose-1,5-bisphosphate isomerase, e2b2 family id=132606 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
hypothetical protein
bjp_ig3402_scaffold_5048_10
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

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8451..8780
DNA (330bp) protein (110aa)
Tax=RBG_13_WOR-2_44_8b_curated
bjp_ig3402_scaffold_5048_11
CG_Gottesman_01, Gottesmanbakteria, Microgenomates, Bacteria

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8863..10368
DNA (1506bp) protein (502aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=CG_Gottesman_01
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RBL_METJA
bjp_ig3402_scaffold_5048_12
GWA2_OD1_36_10, Parcubacteria, Bacteria

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10417..11655
DNA (1239bp) protein (413aa)
Putative thymidine phosphorylase Tax=GWA2_OD1_36_10
hypothetical protein id=5801904 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
hypothetical protein
bjp_ig3402_scaffold_5048_13
CG_Kuenen_03, Kuenenbacteria, Parcubacteria, Bacteria

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11673..11927
DNA (255bp) protein (85aa)
AMP phosphorylase (EC:2.4.-.-) Tax=CG_Kuenen_03
thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] id=5099544 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
bjp_ig3402_scaffold_5048_14
unknown

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11944..12138
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 14 items

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