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bjp_ig3402_scaffold_5607

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_5607_trna_1
unknown

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154..224
DNA (71bp)
transferRNA
bjp_ig3402_scaffold_5607_1

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443..1159
DNA (717bp) protein (239aa)
transposase n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B44F4E
Integrase catalytic region {ECO:0000313|EMBL:KKS90622.1}; TaxID=1618909 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_12.;"
Sea24
bjp_ig3402_scaffold_5607_2
CG_CPR10_02, CG_CPR10, Bacteria

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comp(1303..1857)
DNA (555bp) protein (185aa)
Tax=CG_CPR10_02
bjp_ig3402_scaffold_5607_3
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

comp(1839..3608)
DNA (1770bp) protein (590aa)
hypothetical protein Tax=CG_CPR10_02
Putative uncharacterized protein id=1898958 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
hypothetical protein
bjp_ig3402_scaffold_5607_4
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3975..5006)
DNA (1032bp) protein (344aa)
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:KKP64567.1}; TaxID=1618720 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF2_34_56.;"
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE id=8775 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypE; hydrogenase maturation factor HypE
bjp_ig3402_scaffold_5607_5
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5139..6329)
DNA (1191bp) protein (397aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUL2_CLOC7
hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD {ECO:0000313|EMBL:ADL50917.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
bjp_ig3402_scaffold_5607_6
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6580..6804)
DNA (225bp) protein (75aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WTM4_9EURY
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ENO12243.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
hydrogenase 2 accessory protein HypG
bjp_ig3402_scaffold_5607_7
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6942..7787)
DNA (846bp) protein (282aa)
cytochrome-c3 hydrogenase subunit gamma Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
Oxidoreductase FAD/NAD(P)-binding domain protein id=2874727 bin=GWC1_CPR2_39_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
oxidoreductase FAD/NAD(P)-binding domain-containing protein
bjp_ig3402_scaffold_5607_8
R_OD1_Falkowbacteria_46_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7811..8851)
DNA (1041bp) protein (347aa)
hydrogenase Tax=RIFCSPLOWO2_02_FULL_OD1_Falkowbacteria_46_11b_curated
putative [NiFe] hydrogenase, beta subunit id=5503 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
cytochrome-c3 hydrogenase alpha chain
bjp_ig3402_scaffold_5607_9
unknown

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9096..9260
DNA (165bp) protein (55aa)

This feature has no annotations

bjp_ig3402_scaffold_5607_10
R_RIF_OD1_12_45_11c, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

9269..9745
DNA (477bp) protein (159aa)
DNA polymerase beta subunit n=1 Tax=uncultured bacterium RepID=K1ZN95_9BACT
nucleotidyltransferase; K07076 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_12_45_11c_curated
nucleotidyltransferase
bjp_ig3402_scaffold_5607_11

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9732..10157
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS93523.1}; TaxID=1618826 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_13.;"
hypothetical protein id=86829 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein
bjp_ig3402_scaffold_5607_12
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

10177..11181
DNA (1005bp) protein (335aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Pacearch_04
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375BCE0
bjp_ig3402_scaffold_5607_13
unknown

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11269..11892
DNA (624bp) protein (208aa)

This feature has no annotations

bjp_ig3402_scaffold_5607_14
GWE2_OD1_36_40, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

13368..13730
DNA (363bp) protein (121aa)
ATPase
Uncharacterized protein Tax=GWE2_OD1_36_40
ATPase id=4427995 bin=GWF2_Geobacter_54_21 species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
bjp_ig3402_scaffold_5607_15
GWE2_OD1_36_40, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

13845..14348
DNA (504bp) protein (168aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L2R6_METHD
Uncharacterized protein Tax=GWE2_OD1_36_40
putative ATPase (AAA+ superfamily)
bjp_ig3402_scaffold_5607_16
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

14393..15694
DNA (1302bp) protein (434aa)
slt:Slit_1884 enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=3026 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Tax=BJP_IG2158_OD1_28_51
bjp_ig3402_scaffold_5607_17
unknown

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15996..16574
DNA (579bp) protein (193aa)

This feature has no annotations

bjp_ig3402_scaffold_5607_18
unknown

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16629..17114
DNA (486bp) protein (162aa)

This feature has no annotations

bjp_ig3402_scaffold_5607_19
unknown

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17138..17395
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 20 items

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