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bjp_ig3402_scaffold_6043

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_6043_1
GWB1_OD1_43_8, Parcubacteria, Bacteria

Not on your lists

185..1435
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EM86_9BACT
Putative uncharacterized protein Tax=GWB1_OD1_43_8
hypothetical protein
bjp_ig3402_scaffold_6043_2
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

1469..1876
DNA (408bp) protein (136aa)
NADPH-oxidoreductase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GH78_METTF
NADH dehydrogenase
NADH dehydrogenase {ECO:0000313|EMBL:AII57782.1}; TaxID=1432059 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccar
bjp_ig3402_scaffold_6043_3

Not on your lists

2196..2657
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B5Z5_9BACT
Marine sediment metagenome DNA, contig: S01H4_L02545 {ECO:0000313|EMBL:GAG53603.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative DNA alkylation repair enzyme
bjp_ig3402_scaffold_6043_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

3068..3973
DNA (906bp) protein (302aa)
cysteine synthase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Micrarchaeota_36_9_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ77_SYNAS
bjp_ig3402_scaffold_6043_5
CG_CPR05_01, CG_CPR05, Bacteria

Not on your lists

comp(4036..4560)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037BC507
AMMECR1 domain-containing protein Tax=CG_CPR05_01
AMMECR1 domain-containing protein
bjp_ig3402_scaffold_6043_6
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(4725..5504)
DNA (780bp) protein (260aa)
AMMECR1 protein n=1 Tax=uncultured bacterium RepID=K2ECL5_9BACT
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
bjp_ig3402_scaffold_6043_7
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(5583..6752)
DNA (1170bp) protein (390aa)
Peptide chain release factor eRF subunit 1 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV50_9BACT
Peptide chain release factor eRF subunit 1 {ECO:0000313|EMBL:BAL59479.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
bjp_ig3402_scaffold_6043_trna_1
unknown

Not on your lists

7059..7143
DNA (85bp)
transferRNA
bjp_ig3402_scaffold_6043_8
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(7201..7731)
DNA (531bp) protein (177aa)
hypothetical protein Tax=CG_Deferri_01
bjp_ig3402_scaffold_6043_9
GWF2_OD1_45_11, Parcubacteria, Bacteria

Not on your lists

comp(8071..10620)
DNA (2550bp) protein (850aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:KKT90699.1}; TaxID=1618973 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
Phosphoenolpyruvate synthase id=1899478 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
phosphoenolpyruvate synthase
bjp_ig3402_scaffold_6043_10
RifOxyA12_full_OD1_Moranbacteria_44_15_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10776..11126)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035E6024
hypothetical protein Tax=RifOxyA12_full_OD1_Moranbacteria_44_15_curated
hypothetical protein
bjp_ig3402_scaffold_6043_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(11253..11891)
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Putative uncharacterized protein id=2201938 bin=GWB2_CP_45_9 species=Bacteroides ovatus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
bjp_ig3402_scaffold_6043_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11840..12163)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DJA6_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein
bjp_ig3402_scaffold_6043_13

Not on your lists

comp(12269..13066)
DNA (798bp) protein (266aa)
peptidase M48 Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] id=137407 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Zn-dependent protease with chaperone function
bjp_ig3402_scaffold_6043_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13163..14728)
DNA (1566bp) protein (522aa)
hypothetical protein
Uncharacterized protein id=2224408 bin=GWA2_Ignavibacteria-rel_35_8 species=Thalassiosira oceanica genus=Thalassiosira taxon_order=unknown taxon_class=Coscinodiscophyceae phylum=Bacillariophyta tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
bjp_ig3402_scaffold_6043_15
RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14806..16530)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BAG2_9BACT
Putative lipoprotein Tax=RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated
bjp_ig3402_scaffold_6043_16
unknown

Not on your lists

comp(16575..16667)
DNA (93bp) protein (31aa)

This feature has no annotations

bjp_ig3402_scaffold_6043_17
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

comp(16693..17016)
DNA (324bp) protein (108aa)
LemA-like protein n=1 Tax=uncultured bacterium RepID=K2EBZ9_9BACT
LemA family protein {ECO:0000313|EMBL:KKT94516.1}; TaxID=1618915 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_45_14.;"
LemA protein
bjp_ig3402_scaffold_6043_18
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17224..18600
DNA (1377bp) protein (459aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=15190448 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
DNA/RNA helicase, superfamily II Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
ATP-dependent RNA helicase RhlE
bjp_ig3402_scaffold_6043_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18666..20708)
DNA (2043bp) protein (681aa)
Amylo-alpha-1,6-glucosidase Tax=CG_Woesearch_02
Amylo-alpha-1,6-glucosidase id=5043633 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
bjp_ig3402_scaffold_6043_20
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(20710..22527)
DNA (1818bp) protein (606aa)
glycogen (starch) synthase; K00693 glycogen(starch) synthase [EC:2.4.1.11] id=5044173 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
hypothetical protein Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
glycosyltransferase
bjp_ig3402_scaffold_6043_21
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(22610..22888)
DNA (279bp) protein (93aa)
id=5048028 Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
seg 2..18 id=1241391 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
bjp_ig3402_scaffold_6043_22
RifOxyA12_full_OD1_Moranbacteria_44_15_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22999..24282)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DS01_9BACT rbh
hypothetical protein Tax=RifOxyA12_full_OD1_Moranbacteria_44_15_curated
ATPase
bjp_ig3402_scaffold_6043_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24367..24972)
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71247.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
bjp_ig3402_scaffold_6043_24
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(25003..26280)
DNA (1278bp) protein (426aa)
glycosyl hydrolase family 57 Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
Alpha-amylase id=3158522 bin=GWF2_Planctomycetes_50_10 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes rbh
glycosyl hydrolase family 57
bjp_ig3402_scaffold_6043_25

Not on your lists

comp(26373..27593)
DNA (1221bp) protein (407aa)
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] id=5043627 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKT53716.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
group 1 glycosyl transferase
bjp_ig3402_scaffold_6043_26
CG_Falkow_01, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

28051..29169
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F3D3_9BACT
hypothetical protein Tax=CG_Falkow_01
hypothetical protein
bjp_ig3402_scaffold_6043_27

Not on your lists

comp(29303..30778)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FMS2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CEG11873.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
bjp_ig3402_scaffold_6043_28
R_PER_ii_51_15, PER-ii, Bacteria

Not on your lists

comp(31082..31321)
DNA (240bp) protein (80aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_PER_ii_51_15_curated
Putative uncharacterized protein id=3150130 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
bjp_ig3402_scaffold_6043_29
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(31354..32481)
DNA (1128bp) protein (376aa)
Restriction modification system DNA specificity domain id=4569480 bin=GWF2_Ignavibacteria_33_9 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
restriction modification system DNA specificity domain Tax=GWF2_RIF_IGX_33_9_curated
restriction modification system DNA specificity domain-containing protein
Displaying items 1-30 of 32 in total

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