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bjp_ig3402_scaffold_3628

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig3402_scaffold_3628_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

bjp_ig3402_scaffold_3628_2
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(81..1742)
DNA (1662bp) protein (554aa)
polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
polynucleotide adenylyltransferase/metal dependent phosphohydrolase id=15190681 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
polyA polymerase
bjp_ig3402_scaffold_3628_trna_1
unknown

Not on your lists

1788..1859
DNA (72bp)
transferRNA
bjp_ig3402_scaffold_3628_3
GWE2_OD1_46_68, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2307..4973
DNA (2667bp) protein (889aa)
id=1770729 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKU40484.1}; TaxID=1618994 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWE2_46_68.;"
hypothetical protein
bjp_ig3402_scaffold_3628_4
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

5185..5544
DNA (360bp) protein (120aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=15190694 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
putative RNA polymerase ECF-type sigma factor
bjp_ig3402_scaffold_3628_5
unknown

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5555..6034
DNA (480bp) protein (160aa)

This feature has no annotations

bjp_ig3402_scaffold_3628_6
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(6088..6363)
DNA (276bp) protein (92aa)
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
nucleoid DNA-binding protein id=15190698 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA-binding protein hu
bjp_ig3402_scaffold_3628_7
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(6479..8005)
DNA (1527bp) protein (509aa)
metal dependent phosphohydrolase (EC:3.1.4.16); K06950 uncharacterized protein id=15190703 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete rbh
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
HDIG/KH domain-containing protein
bjp_ig3402_scaffold_3628_8
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

8101..9651
DNA (1551bp) protein (517aa)
gpmI; phosphoglyceromutase; K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
gpmI; phosphoglyceromutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] id=15189789 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
bjp_ig3402_scaffold_3628_9
R_OD1_Wolfebacteria_38_11, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9658..10980)
DNA (1323bp) protein (441aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_38_11_curated
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=15190064 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
enolase (EC:4.2.1.11)
bjp_ig3402_scaffold_3628_10
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(10981..12195)
DNA (1215bp) protein (405aa)
hypothetical protein; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=CG_CPR10_03
yodQ; acetylornithine deacetylase (EC:3.5.1.16)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C1R0_9BACT rbh
bjp_ig3402_scaffold_3628_11
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12229..12861)
DNA (633bp) protein (211aa)
Putative TesA-like protein protease n=1 Tax=uncultured bacterium RepID=K2DVI5_9BACT
GDSL family lipase Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
bjp_ig3402_scaffold_3628_12
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(12836..14131)
DNA (1296bp) protein (432aa)
phosphoenolpyruvate synthase (EC:2.7.9.2 2.7.3.9) Tax=CG_Wolfe_01
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=15190256 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
phosphoenolpyruvate synthase (EC:2.7.9.2)
bjp_ig3402_scaffold_3628_13
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(15284..16576)
DNA (1293bp) protein (431aa)
glycerate 2-kinase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] Tax=CG_Wolfe_01
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81] id=15190705 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
glycerate 2-kinase (EC:1.1.1.81)
bjp_ig3402_scaffold_3628_14
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16585..17310)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZW08_9FIRM id=17489 bin=ACD1 species=[Ruminococcus] obeum genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Glycosyl transferase family 2 Tax=GWE1_OD1_ACD7_35_17
glycoside hydrolase family 2 protein
bjp_ig3402_scaffold_3628_15
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(18794..19699)
DNA (906bp) protein (302aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=15190709 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Isoleucine-tRNA ligase
bjp_ig3402_scaffold_3628_16
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(19756..20574)
DNA (819bp) protein (273aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
Isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=5803283 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
bjp_ig3402_scaffold_3628_17
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


comp(20644..22365)
DNA (1722bp) protein (574aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
lba:Lebu_1977 arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] id=133304 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
arginyl-tRNA synthetase
bjp_ig3402_scaffold_3628_18
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

22388..22831
DNA (444bp) protein (148aa)
ssrA-binding protein Tax=CG_Wolfe_01
SsrA-binding protein id=3091478 bin=GWC1_OD1_38_17 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
smpB; ssrA RNA (tmRNA)-binding protein
bjp_ig3402_scaffold_3628_19
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

23241..23663
DNA (423bp) protein (141aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. L2-50 RepID=A7VD35_9CLOT id=133285 bin=ACD81 species=Clostridium sp. L2-50 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
bacterial translation initiation factor 3 (bIF-3) Tax=CG_Wolfe_01
infC; initiation factor IF-3
bjp_ig3402_scaffold_3628_20
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


23807..24157
DNA (351bp) protein (117aa)
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=CG_Wolfe_01
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=15189770 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplT; 50S ribosomal protein L20
bjp_ig3402_scaffold_3628_21
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(24144..24386)
DNA (243bp) protein (81aa)
inosine-5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=CG_CPR10_03
Inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000372F016
bjp_ig3402_scaffold_3628_22
unknown

Not on your lists

25205..25483
DNA (279bp) protein (93aa)

This feature has no annotations

bjp_ig3402_scaffold_3628_23
R_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(25460..25858)
DNA (399bp) protein (133aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_47_10b_curated
bjp_ig3402_scaffold_3628_24
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(25860..26495)
DNA (636bp) protein (212aa)
PHP domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDQ2_DESAR
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=CG_Wolfe_01
PHP domain-containing protein
bjp_ig3402_scaffold_3628_25
unknown

Not on your lists

comp(27489..27599)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 26 items

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