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Ig5770_scaffold_1891

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Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_1891_1

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265..846
DNA (582bp) protein (194aa)
Putative molybdenum cofactor guanylyltransferase {ECO:0000313|EMBL:CEG12733.1}; EC=2.7.7.77 {ECO:0000313|EMBL:CEG12733.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00035CEE5F
molybdopterin-guanine dinucleotide biosynthesis protein
Ig5770_scaffold_1891_2
unknown

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comp(855..1046)
DNA (192bp) protein (64aa)

This feature has no annotations

Ig5770_scaffold_1891_3
unknown

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1220..1642
DNA (423bp) protein (141aa)

This feature has no annotations

Ig5770_scaffold_1891_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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1593..2438
DNA (846bp) protein (282aa)
hypothetical protein; K07055 tRNA wybutosine-synthesizing protein 2 [EC:2.1.1.-] id=18248924 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_5
unknown

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2456..2605
DNA (150bp) protein (50aa)

This feature has no annotations

Ig5770_scaffold_1891_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(2607..3356)
DNA (750bp) protein (250aa)
tRNA (guanine-N1)-methyltransferase n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B53C75
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_7
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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comp(3374..3982)
DNA (609bp) protein (203aa)
SNARE associated Golgi protein-like protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAD2_METSL
hypothetical protein
Tax=RBG_13_Euryarchaeota_61_15_curated
Ig5770_scaffold_1891_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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4277..4765
DNA (489bp) protein (163aa)
diphthine synthase (EC:2.1.1.98)
diphthine synthase n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B41E2B
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_9
unknown

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4750..4935
DNA (186bp) protein (62aa)

This feature has no annotations

Ig5770_scaffold_1891_10
unknown

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comp(4942..5373)
DNA (432bp) protein (144aa)

This feature has no annotations

Ig5770_scaffold_1891_11
unknown

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comp(5397..5735)
DNA (339bp) protein (113aa)

This feature has no annotations

Ig5770_scaffold_1891_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5749..6021
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRN8_ARCVS
hypothetical protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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6250..7632
DNA (1383bp) protein (461aa)
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(8407..9150)
DNA (744bp) protein (248aa)
zinc/iron permease id=5802294 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Zinc/iron permease {ECO:0000313|EMBL:KKR05315.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
Ig5770_scaffold_1891_15
R_OD1_Nomurabacteria_42_17, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9186..9647
DNA (462bp) protein (154aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_42_17_curated
Ig5770_scaffold_1891_16
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


comp(9649..9792)
DNA (144bp) protein (48aa)
RNA polymerase, N/8 Kd subunit n=1 Tax=mine drainage metagenome RepID=T1APH1_9ZZZZ
DNA-directed RNA polymerase subunit N
Tax=CG_Pacearch_04
Ig5770_scaffold_1891_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(9946..10449)
DNA (504bp) protein (168aa)
30S ribosomal protein S9 n=2 Tax=Pyrococcus furiosus RepID=RS9_PYRFU
rps9p; 30S ribosomal protein S9
Tax=CG_Aenigma_01
Ig5770_scaffold_1891_18
unknown

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comp(10412..10861)
DNA (450bp) protein (150aa)

This feature has no annotations

Ig5770_scaffold_1891_19

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comp(10874..11407)
DNA (534bp) protein (178aa)
Large subunit ribosomal protein L6 {ECO:0000313|EMBL:AJS13179.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl6p; 50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 id=18248311 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L6
Ig5770_scaffold_1891_20
unknown

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comp(11370..11471)
DNA (102bp) protein (34aa)

This feature has no annotations

Ig5770_scaffold_1891_21
unknown

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comp(11468..11665)
DNA (198bp) protein (66aa)

This feature has no annotations

Ig5770_scaffold_1891_22
unknown

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comp(12116..12529)
DNA (414bp) protein (138aa)

This feature has no annotations

Ig5770_scaffold_1891_23

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comp(12541..12927)
DNA (387bp) protein (129aa)
Small subunit ribosomal protein S8 {ECO:0000313|EMBL:AJS13178.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8 id=4909399 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rps8p; 30S ribosomal protein S8P
Ig5770_scaffold_1891_24
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(13386..13934)
DNA (549bp) protein (183aa)
50S ribosomal protein L5P id=4909397 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
50S ribosomal protein L5P
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_25
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(14221..14901)
DNA (681bp) protein (227aa)
30S ribosomal protein S4e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD1_METFV
30S ribosomal protein S4e
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_26

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comp(15022..15411)
DNA (390bp) protein (130aa)
50S ribosomal protein L24P; K02895 large subunit ribosomal protein L24 id=5044374 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rpl24p; 50S ribosomal protein L24P
Ig5770_scaffold_1891_27
unknown

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comp(15408..15827)
DNA (420bp) protein (140aa)

This feature has no annotations

Ig5770_scaffold_1891_28
unknown

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comp(15966..16160)
DNA (195bp) protein (65aa)

This feature has no annotations

Ig5770_scaffold_1891_29
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(16167..16565)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=RL14_ARCFU
rpl14p; 50S ribosomal protein L14P
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_1891_30

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comp(16894..17289)
DNA (396bp) protein (132aa)
Small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS13174.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S17P id=4909392 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S17
Displaying items 1-30 of 57 in total

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