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Ig5770_scaffold_5138

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_5138_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(198..413)
DNA (216bp) protein (72aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Ig5770_scaffold_5138_2
unknown

Not on your lists

comp(419..1384)
DNA (966bp) protein (322aa)

This feature has no annotations

Ig5770_scaffold_5138_3
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(1426..1719)
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=5799706 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA-binding protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_5138_4
unknown

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comp(1731..1886)
DNA (156bp) protein (52aa)

This feature has no annotations

Ig5770_scaffold_5138_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(1896..2222)
DNA (327bp) protein (109aa)
RNA polymerase rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] id=18248222 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RNA polymerase Rpb4
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_5138_6
unknown

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comp(2244..2495)
DNA (252bp) protein (84aa)

This feature has no annotations

Ig5770_scaffold_5138_7
unknown

Not on your lists

comp(2492..2629)
DNA (138bp) protein (46aa)

This feature has no annotations

Ig5770_scaffold_5138_8
unknown

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comp(2662..2913)
DNA (252bp) protein (84aa)

This feature has no annotations

Ig5770_scaffold_5138_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


comp(2925..3206)
DNA (282bp) protein (94aa)
50S ribosomal protein L21e n=1 Tax=Methanoregula boonei (strain 6A8) RepID=RL21_METB6
50S ribosomal protein L21
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_5138_10
unknown

Not on your lists

comp(3262..3624)
DNA (363bp) protein (121aa)

This feature has no annotations

Ig5770_scaffold_5138_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(3735..4976)
DNA (1242bp) protein (414aa)
THUMP domain-containing protein; K07583 tRNA pseudouridine synthase 10 [EC:5.4.99.-] id=5044299 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
THUMP domain-containing protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_5138_12

Not on your lists

5039..5527
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG63_PYRYC
Marine sediment metagenome DNA, contig: S12H4_L01489 {ECO:0000313|EMBL:GAI87608.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hypothetical protein
Ig5770_scaffold_5138_13
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(5907..6107)
DNA (201bp) protein (67aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VRZ2_METIM
RNA-binding protein Nop10p
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Ig5770_scaffold_5138_14
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6107..6619)
DNA (513bp) protein (171aa)
Protein belonging to Uncharacterized protein family UPF0157 n=1 Tax=mine drainage metagenome RepID=T0YRX0_9ZZZZ
glutamate-rich protein grpb
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
Ig5770_scaffold_5138_15
unknown

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comp(6616..7155)
DNA (540bp) protein (180aa)

This feature has no annotations

Ig5770_scaffold_5138_16
unknown

Not on your lists

comp(7130..7636)
DNA (507bp) protein (169aa)

This feature has no annotations

Ig5770_scaffold_5138_17
Nematocida parisii, Nematocida, Microsporidia, Fungi

Not on your lists

comp(7643..8197)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nematocida parisii (strain ERTm1 / ATCC PRA-289) RepID=I3EM83_NEMP1
Uncharacterized protein {ECO:0000313|EMBL:EIJ92991.1}; TaxID=881290 species="Eukaryota; Fungi; Microsporidia; Nematocida.;" source="Nematocida parisii (strain ERTm1 / ATCC PRA-289) (Nematode killer; fungus).;"
type 11 methyltransferase
Ig5770_scaffold_5138_18
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(8230..9012)
DNA (783bp) protein (261aa)
Translation initiation factor 2 subunit alpha n=2 Tax=Methanothermobacter thermautotrophicus RepID=IF2A_METTH
translation initiation factor IF-2
Tax=RBG_16_Micrarchaeota_36_9_curated
Displaying 18 items

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