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Ig5770_scaffold_8413

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Ig5770_scaffold_8413_1

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135..830
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B48B9D
Uncharacterized protein {ECO:0000313|EMBL:CEG11046.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
Ig5770_scaffold_8413_2

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812..2401
DNA (1590bp) protein (530aa)
N-6 DNA Methylase family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKH7_9BACT rbh
Putative N-6 DNA Methylase family {ECO:0000313|EMBL:CEG11045.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
N-6 DNA methylase rbh
Ig5770_scaffold_8413_3
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2439..2696)
DNA (258bp) protein (86aa)
UPF0145 protein Desti_0959 n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C286_DESTA
hypothetical protein
UPF0145 protein Desti_0959 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
Ig5770_scaffold_8413_4
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(2693..3592)
DNA (900bp) protein (300aa)
SecD/SecF/SecDF export membrane protein; K03072 preprotein translocase subunit SecD id=5043055 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
secD; Protein-export membrane protein SecD
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_8413_5
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(3633..4313)
DNA (681bp) protein (227aa)
SecD/SecF/SecDF export membrane protein; K03072 preprotein translocase subunit SecD id=18248651 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
SecD/SecF/SecDF export membrane protein
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_8413_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(4397..5152)
DNA (756bp) protein (252aa)
Protein-export membrane protein SecF n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FVT4_METM5
preprotein translocase subunit SecF
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_8413_7
unknown

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5228..5662
DNA (435bp) protein (145aa)

This feature has no annotations

Ig5770_scaffold_8413_8
unknown

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comp(5970..6128)
DNA (159bp) protein (53aa)

This feature has no annotations

Ig5770_scaffold_8413_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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6219..7211
DNA (993bp) protein (331aa)
hypothetical protein, partial n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000365B1F1
geranylgeranyl reductase
Tax=RBG_16_Micrarchaeota_36_9_curated
Ig5770_scaffold_8413_10
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(7276..7902)
DNA (627bp) protein (209aa)
Probable TesA-like protease n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YQM8_9FLAO id=36150 bin=ACD30 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative tesA-like protease
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
Ig5770_scaffold_8413_11
AR5, Aenigmarchaeota, DPANN, Archaea

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7964..8935
DNA (972bp) protein (324aa)
hypothetical protein; K07027 id=18248648 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
Ig5770_scaffold_8413_12
GWA2_OD1_40_10_partial, Magasanikbacteria, Parcubacteria, Bacteria

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9058..9912
DNA (855bp) protein (285aa)
UniRef90_B0QTA2 Putative DNA modification methylase n=1 Tax=Haemophilus parasuis 29755 RepID=B0QTA2_HAEPR id=162819 bin=MEL_C1 species=Haemophilus parasuis genus=Haemophilus taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=MEL_C1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:KKR35020.1}; TaxID=1619037 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_40_10.;"
DNA modification methylase
Ig5770_scaffold_8413_13
GWA1_OD1_36_15, Nomurabacteria, Parcubacteria, Bacteria

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comp(9899..12346)
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Campylobacter upsaliensis RM3195 RepID=Q4HP84_CAMUP
Uncharacterized protein {ECO:0000313|EMBL:KKP97353.1}; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;"
DNA methylase
Ig5770_scaffold_8413_14
unknown

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comp(12343..12789)
DNA (447bp) protein (149aa)

This feature has no annotations

Ig5770_scaffold_8413_15
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(12829..13296)
DNA (468bp) protein (156aa)
Archaeal flagellin, N-terminal id=18248159 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Ig5770_scaffold_8413_16
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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13357..13917
DNA (561bp) protein (187aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
RNA 3'-phosphate cyclase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBN3_METMS
Displaying 16 items

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