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ar4r2_scaffold_2236

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_2236_1

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105..1115
DNA (1011bp) protein (337aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tjr:TherJR_1182 Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB id=34126 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ruvB; Holliday junction DNA helicase RuvB rbh
ar4r2_scaffold_2236_2
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

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1117..2301
DNA (1185bp) protein (395aa)
Uridine kinase n=1 Tax=Ricinus communis RepID=B9RLC2_RICCO
uridine kinase
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
ar4r2_scaffold_2236_3

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2306..3205
DNA (900bp) protein (300aa)
Methicillin resistance protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FD43_9BACT
Methicillin resistance protein {ECO:0000313|EMBL:EKE29051.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
methicillin resistance protein
ar4r2_scaffold_2236_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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3289..3864
DNA (576bp) protein (192aa)
Superoxide dismutase n=2 Tax=Alcaligenes RepID=M5IWW5_9BURK rbh
superoxide dismutase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_2236_5
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3953..4687
DNA (735bp) protein (245aa)
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
Ribonuclease H n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=RNH_DESRM
ribonuclease H
ar4r2_scaffold_2236_6
CG_CPR08_01, CG_CPR08, Bacteria

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comp(4718..7417)
DNA (2700bp) protein (900aa)
leucyl-tRNA synthetase
Leucine--tRNA ligase id=1931440 bin=GWE2_Spirochaete_31_10 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good + rbh
Tax=CG_CPR08_01
ar4r2_scaffold_2236_7

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comp(7522..7890)
DNA (369bp) protein (123aa)
transmembrane_regions 52..74 id=124035 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29660.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_2236_8
CG_GN02-01, Gracilibacteria, Bacteria

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comp(7906..8244)
DNA (339bp) protein (113aa)
transmembrane_regions 7..29 id=124248 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-01
ar4r2_scaffold_2236_9
CG_GN02-02, Gracilibacteria, Bacteria

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8383..8937
DNA (555bp) protein (185aa)
O-methyltransferase family 3 id=69571 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
O-methyltransferase family protein
Tax=CG_GN02-02
ar4r2_scaffold_2236_10
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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8939..10435
DNA (1497bp) protein (499aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=754505 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter actinomycetemcomitans D17P-3.;"
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00035D4013 rbh
thiamin biosynthesis protein ThiI, putative
ar4r2_scaffold_2236_11
unknown

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10483..10956
DNA (474bp) protein (158aa)

This feature has no annotations

Displaying 11 items

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