ggKbase home page

ar4r2_scaffold_970

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_970_1
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..506
DNA (504bp) protein (168aa)
Integrase catalytic subunit n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQN4_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:ERG18313.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
transposase
ar4r2_scaffold_970_2

Not on your lists

886..2604
DNA (1719bp) protein (573aa)
Fimbrial protein pilin n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FX25_9BACT
Fimbrial protein pilin {ECO:0000313|EMBL:EKE26427.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_970_3

Not on your lists

comp(2912..4597)
DNA (1686bp) protein (562aa)
DEAD/DEAH box helicase domain-containing protein; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] id=69175 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD65980.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_970_4

Not on your lists

4925..5716
DNA (792bp) protein (264aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BWJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66604.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_970_5
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

5778..6359
DNA (582bp) protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP68329.1}; TaxID=1618707 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
hypothetical protein id=129966 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
ar4r2_scaffold_970_6
unknown

Not on your lists

6441..8294
DNA (1854bp) protein (618aa)

This feature has no annotations

ar4r2_scaffold_970_7
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(8318..8770)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AVP0_9BACT
Tax=CG_GN02-02
ar4r2_scaffold_970_8
unknown

Not on your lists

8931..9815
DNA (885bp) protein (295aa)

This feature has no annotations

ar4r2_scaffold_970_9

Not on your lists

comp(9825..10982)
DNA (1158bp) protein (386aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Queuine tRNA-ribosyltransferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YVX8_9BACT rbh
queuine tRNA-ribosyltransferase rbh
ar4r2_scaffold_970_10

Not on your lists

comp(11070..11690)
DNA (621bp) protein (207aa)
Metal-dependent phosphohydrolase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G6H5_9BACT
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EKE29932.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
metal dependent phosphohydrolase
ar4r2_scaffold_970_11

Not on your lists

comp(11693..13009)
DNA (1317bp) protein (439aa)
rasP; Zinc metalloprotease RasP (EC:3.4.24.-)
putative membrane-associated protease id=68872 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66148.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_970_12
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13719..14885
DNA (1167bp) protein (389aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0J0_9CLOT
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EET84996.1}; Flags: Precursor;; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
peptidase S8 and S53 subtilisin kexin sedolisin
ar4r2_scaffold_970_13

Not on your lists

14923..18321
DNA (3399bp) protein (1133aa)
transmembrane_regions 12..34 id=49444 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE28180.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Cna B domain-containing protein
ar4r2_scaffold_970_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

18383..18841
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GD98_9BACT
Tax=ACD3
ar4r2_scaffold_970_15

Not on your lists

18844..19794
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4I6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44467.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
peptidase S8 and S53 subtilisin kexin sedolisin
ar4r2_scaffold_970_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

19840..20325
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GD98_9BACT
Tax=ACD3
ar4r2_scaffold_970_17

Not on your lists

20357..20890
DNA (534bp) protein (178aa)
transmembrane_regions 12..34 id=49444 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28180.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_970_18

Not on your lists

21134..21391
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4I6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44467.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_970_19

Not on your lists

21456..22277
DNA (822bp) protein (274aa)
transmembrane_regions 15..37 id=49436 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28174.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_970_20

Not on your lists

comp(22274..23584)
DNA (1311bp) protein (437aa)
DNA repair protein RadA (EC:2.1.1.63) rbh
ppe:PEPE_1503 DNA repair protein RadA; K04485 DNA repair protein RadA/Sms id=69171 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_970_21
unknown

Not on your lists

23842..24042
DNA (201bp) protein (67aa)

This feature has no annotations

ar4r2_scaffold_970_22
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24039..24548)
DNA (510bp) protein (170aa)
Integrase catalytic subunit n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQN4_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:ERG18313.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
transposase
Displaying 22 items

View Taxonomy