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AR1-0.1_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR1-0.1_scaffold_25_1

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3..1559
DNA (1557bp) protein (519aa)
seg 207..224 id=50833 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28117.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_25_2
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

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comp(1610..4414)
DNA (2805bp) protein (935aa)
Tax=BJP_IG2158_OD1_28_51
AR1-0.1_scaffold_25_3

Not on your lists

comp(4474..6117)
DNA (1644bp) protein (548aa)
PHP domain protein; K07053 id=49633 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27545.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR1-0.1_scaffold_25_4

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6287..7024
DNA (738bp) protein (246aa)
Transcriptional regulator, TrmB n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GBI2_9BACT
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EKE27544.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
iclR helix-turn-helix domain protein
AR1-0.1_scaffold_25_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

7113..8570
DNA (1458bp) protein (486aa)
seg 135..159 id=124271 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-01
AR1-0.1_scaffold_25_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(8644..8961)
DNA (318bp) protein (106aa)
seg 87..105 id=50527 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=ACD2
AR1-0.1_scaffold_25_7

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comp(8978..9574)
DNA (597bp) protein (199aa)
50S ribosomal protein L25 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YDL1_9BACT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
AR1-0.1_scaffold_25_8
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9675..10154)
DNA (480bp) protein (160aa)
Purine nucleoside phosphorylase {ECO:0000313|EMBL:CDF58462.1}; EC=2.4.2.1 {ECO:0000313|EMBL:CDF58462.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Purine nucleoside phosphorylase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQG5_9CLOT
hypothetical protein
AR1-0.1_scaffold_25_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10326..11318
DNA (993bp) protein (331aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Primosomal protein N' n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SDC1_ACIJO id=69529 bin=ACD49 species=Acinetobacter johnsonii genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
priA; primosome assembly protein PriA
AR1-0.1_scaffold_25_10

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11409..12530
DNA (1122bp) protein (374aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G780_9BACT rbh
AR1-0.1_scaffold_25_11

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13148..14407
DNA (1260bp) protein (420aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74); K08070 2-alkenal reductase [EC:1.3.1.74] id=68663 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66587.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
AR1-0.1_scaffold_25_12

Not on your lists

comp(14960..17602)
DNA (2643bp) protein (881aa)
heat repeat-containing PBS lyase id=127849 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Heat repeat-containing PBS lyase {ECO:0000313|EMBL:EKD25950.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
AR1-0.1_scaffold_25_13
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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17735..18391
DNA (657bp) protein (219aa)
hypothetical protein LinasL1_03164 id=4563132 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_13_Caldithrix_44_9_curated
AR1-0.1_scaffold_25_14
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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19345..20472
DNA (1128bp) protein (376aa)
DNA adenine methylase {ECO:0000313|EMBL:EDS72596.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EDS72596.1};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
DNA adenine methylase (dam) (EC:2.1.1.72) rbh
DNA adenine methylase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C9M5_9FIRM rbh
AR1-0.1_scaffold_25_15
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20476..22170
DNA (1695bp) protein (565aa)
NTPase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B5E092
hypothetical protein
Tax=CG_Flavo_02
AR1-0.1_scaffold_25_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

22185..22997
DNA (813bp) protein (271aa)
MjaII restriction endonuclease n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IK94_9BACT
MjaII restriction endonuclease
Tax=CG_Pacearch_06
AR1-0.1_scaffold_25_17
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

23009..23824
DNA (816bp) protein (272aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=754027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis F0421.;"
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Treponema phagedenis F0421 RepID=E7NR78_TREPH rbh
DNA-cytosine methyltransferase
AR1-0.1_scaffold_25_18
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

23889..24110
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XAZ8_THEPJ
hypothetical protein
Tax=RBG_13_WOR-2_44_8b_curated
AR1-0.1_scaffold_25_19
RIFOXYD2_FULL_PER_ii_58_15_curated, PER-ii, Bacteria

Not on your lists

comp(24533..25177)
DNA (645bp) protein (215aa)
integral membrane protein
integral membrane protein id=982152 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFOXYD2_FULL_PER_ii_58_15_curated
AR1-0.1_scaffold_25_20
unknown

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comp(25389..25544)
DNA (156bp) protein (52aa)

This feature has no annotations

AR1-0.1_scaffold_25_21

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comp(25649..25906)
DNA (258bp) protein (86aa)
Transcriptional regulator n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB04_CLOBU id=35091 bin=ACD2 species=Clostridium butyricum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Transcriptional regulator {ECO:0000313|EMBL:EKE29879.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Transcriptional regulator
AR1-0.1_scaffold_25_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

26044..26319
DNA (276bp) protein (92aa)
protein of unknown function DUF134 id=28319 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
AR1-0.1_scaffold_25_23
unknown

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26355..26564
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=1909852 bin=GWE2_Bacteroidetes_40_15 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
AR1-0.1_scaffold_25_24

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26633..27799
DNA (1167bp) protein (389aa)
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KHO52445.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
major facilitator superfamily permease id=5091216 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
ydhC; Inner membrane transport protein YdhC
AR1-0.1_scaffold_25_25
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(27838..28473)
DNA (636bp) protein (212aa)
integral membrane protein
integral membrane protein id=982152 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:AKG52779.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
AR1-0.1_scaffold_25_26
unknown

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comp(28504..29739)
DNA (1236bp) protein (412aa)

This feature has no annotations

AR1-0.1_scaffold_25_27
R_OD1_Nomurabacteria_33_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

29851..30432
DNA (582bp) protein (194aa)
Probable GTP-binding protein EngB n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=ENGB_NATTJ
GTP-binding protein HSR1-related
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_33_12_curated
AR1-0.1_scaffold_25_28
unknown

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30508..31044
DNA (537bp) protein (179aa)

This feature has no annotations

AR1-0.1_scaffold_25_29
CG_GN02-02, Gracilibacteria, Bacteria

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comp(31060..33294)
DNA (2235bp) protein (745aa)
RNA binding S1 domain protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQJ7_CLOB8 rbh
RNA-binding S1 domain-containing protein
Tax=CG_GN02-02
AR1-0.1_scaffold_25_30
unknown

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33435..33695
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

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