ggKbase home page

AR2-0.65_scaffold_183

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR2-0.65_scaffold_183_1
unknown

Not on your lists

2..91
DNA (90bp) protein (30aa)

This feature has no annotations

AR2-0.65_scaffold_183_2
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

186..3722
DNA (3537bp) protein (1179aa)
Bacterial surface protein 26-residue PARCEL repeat (3 repeats) n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VPP4_9SPHI
Bacterial surface protein 26-residue PARCEL repeat (3 repeats) {ECO:0000313|EMBL:EFK57891.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
PARCEL domain-containing protein
AR2-0.65_scaffold_183_3
Providencia alcalifaciens, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3819..5297
DNA (1479bp) protein (493aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=520999 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia alcalifaciens DSM 30120.;"
tRNA sulfurtransferase n=1 Tax=Providencia alcalifaciens DSM 30120 RepID=B6XA68_9ENTR rbh
thiI; thiamine biosynthesis protein ThiI rbh
AR2-0.65_scaffold_183_4

Not on your lists


comp(5348..5563)
DNA (216bp) protein (72aa)
Ribosomal protein S18 n=1 Tax=sediment metagenome RepID=D9PJ92_9ZZZZ
Ribosomal protein S18 {ECO:0000313|EMBL:EFK96369.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rpsR; 30S ribosomal protein S18
AR2-0.65_scaffold_183_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5586..5984)
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ04_9BACT
hypothetical protein
Tax=CG_GN02-01
AR2-0.65_scaffold_183_6
ACD78, Gracilibacteria, Bacteria

Not on your lists


comp(6013..6297)
DNA (285bp) protein (95aa)
30S ribosomal protein S6 n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XIN4_9BACT
rpsF; SSU ribosomal protein S6P
Tax=ACD78
AR2-0.65_scaffold_183_7

Not on your lists

6526..7425
DNA (900bp) protein (300aa)
GTPase Era n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AFP6_9BACT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
GTPase Era
AR2-0.65_scaffold_183_8

Not on your lists

comp(7442..7870)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F495_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE25961.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Crp/Fnr family transcriptional regulator
AR2-0.65_scaffold_183_9

Not on your lists

comp(7894..10362)
DNA (2469bp) protein (823aa)
Translation initiation factor IF-2 n=1 Tax=uncultured bacterium RepID=K2E0L5_9BACT rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
translation initiation factor IF-2
AR2-0.65_scaffold_183_10

Not on your lists

10504..10992
DNA (489bp) protein (163aa)
RNA-binding protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FTR9_9BACT
RNA-binding protein {ECO:0000313|EMBL:EKE26323.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
R3H domain protein
AR2-0.65_scaffold_183_11

Not on your lists

11079..12212
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BUZ9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66059.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR2-0.65_scaffold_183_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

12226..12660
DNA (435bp) protein (145aa)
transmembrane_regions 5..24 id=73903 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
AR2-0.65_scaffold_183_13
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

12689..13030
DNA (342bp) protein (114aa)
transmembrane_regions 9..26 id=123379 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-02
AR2-0.65_scaffold_183_14
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

13036..13386
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYV3_9BACT
Tax=CG_GN02-02
AR2-0.65_scaffold_183_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13415..13840)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FVQ1_9BACT
Tax=CG_GN02-01
AR2-0.65_scaffold_183_16

Not on your lists

comp(13857..14747)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G051_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE27527.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR2-0.65_scaffold_183_17
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(14753..15745)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWI1_9BACT
Tax=ACD78
AR2-0.65_scaffold_183_18

Not on your lists

comp(15755..18610)
DNA (2856bp) protein (952aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZF61_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD47636.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
AR2-0.65_scaffold_183_trna_1
unknown

Not on your lists

18838..18910
DNA (73bp)
transferRNA Lys
AR2-0.65_scaffold_183_19
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19040..19387
DNA (348bp) protein (116aa)
Thioredoxin n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKX6_MARHT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
AR2-0.65_scaffold_183_20
unknown

Not on your lists

comp(19428..19733)
DNA (306bp) protein (102aa)

This feature has no annotations

AR2-0.65_scaffold_183_21
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(19746..20351)
DNA (606bp) protein (202aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=131430 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
HAD family hydrolase
Tax=CG_Elusi_05
AR2-0.65_scaffold_183_22

Not on your lists

comp(20354..20824)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ46_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30221.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR2-0.65_scaffold_183_23

Not on your lists

comp(20948..21400)
DNA (453bp) protein (151aa)
AP4A hydrolase id=123837 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
AP4A hydrolase {ECO:0000313|EMBL:EKD30222.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
glycosyl transferase, group 1
AR2-0.65_scaffold_183_24
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

21552..22718
DNA (1167bp) protein (389aa)
mdh; malate dehydrogenase (EC:1.1.1.38) rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ED60_9BACT rbh
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
AR2-0.65_scaffold_183_25

Not on your lists

comp(22741..23490)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FXT9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26707.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR2-0.65_scaffold_183_26
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

comp(23454..24392)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q55FN0_DICDI
Uncharacterized protein {ECO:0000313|EMBL:EAL73468.1}; TaxID=44689 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
Cna protein B-type domain-containing protein
AR2-0.65_scaffold_183_27

Not on your lists

comp(24505..25167)
DNA (663bp) protein (221aa)
seg 14..29 id=124093 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30183.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
AR2-0.65_scaffold_183_28
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


25336..27216
DNA (1881bp) protein (627aa)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) rbh
DNA gyrase, A subunit n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GGF4_9BACT rbh
Tax=CG_GN02-01
AR2-0.65_scaffold_183_29
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

27263..27850
DNA (588bp) protein (196aa)
DNA gyrase, A subunit (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YBZ5_9BACT
DNA gyrase subunit A
Tax=CG_GN02-01
Displaying 30 items

View Taxonomy