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ar4r2_scaffold_156

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_156_1
CG_GN02-02, Gracilibacteria, Bacteria

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2..298
DNA (297bp) protein (99aa)
Transposase IS200-family protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LV57_HIPMA
transposase IS200-family protein
Tax=CG_GN02-02
ar4r2_scaffold_156_2
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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404..1348
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F4Q1_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EKU96410.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
Putative hemolysin
ar4r2_scaffold_156_3

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comp(1477..2409)
DNA (933bp) protein (311aa)
rluA; pseudouridylate synthase, 23S RNA-specific; K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] id=131964 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Pseudouridylate synthase, 23S RNA-specific {ECO:0000313|EMBL:EKD25585.1}; EC=5.4.99.12 {ECO:0000313|EMBL:EKD25585.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Pseudouridine synthase
ar4r2_scaffold_156_4
ACD80, SR1, Bacteria

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2569..3138
DNA (570bp) protein (190aa)
seg 31..52 id=131930 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Tax=ACD80
ar4r2_scaffold_156_trna_11
unknown

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comp(3290..3363)
DNA (74bp)
transferRNA Gly
ar4r2_scaffold_156_trna_10
unknown

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comp(3415..3488)
DNA (74bp)
transferRNA Met
ar4r2_scaffold_156_trna_9
unknown

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comp(3522..3595)
DNA (74bp)
transferRNA Val
ar4r2_scaffold_156_trna_8
unknown

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comp(3758..3829)
DNA (72bp)
transferRNA Glu
ar4r2_scaffold_156_trna_7
unknown

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comp(3847..3920)
DNA (74bp)
transferRNA Asp
ar4r2_scaffold_156_trna_6
unknown

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comp(3957..4029)
DNA (73bp)
transferRNA Thr
ar4r2_scaffold_156_5
ACD80, SR1, Bacteria

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comp(4046..4306)
DNA (261bp) protein (87aa)
Ribosomal_S20p 4..84 id=131958 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
hypothetical protein
Tax=ACD80
ar4r2_scaffold_156_trna_5
unknown

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comp(4344..4416)
DNA (73bp)
transferRNA Asn
ar4r2_scaffold_156_trna_4
unknown

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comp(4499..4579)
DNA (81bp)
transferRNA Leu
ar4r2_scaffold_156_trna_3
unknown

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comp(4593..4665)
DNA (73bp)
transferRNA Gln
ar4r2_scaffold_156_trna_2
unknown

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comp(4709..4780)
DNA (72bp)
transferRNA Met
ar4r2_scaffold_156_trna_1
unknown

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comp(4846..4916)
DNA (71bp)
transferRNA Gln
ar4r2_scaffold_156_6

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5084..6061
DNA (978bp) protein (326aa)
Tryptophanyl-tRNA synthetase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N354_9BACT id=131961 bin=ACD80 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD80 organism_group=SR1 rbh
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:EKD25627.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Tryptophan-tRNA ligase
ar4r2_scaffold_156_7

Not on your lists

6083..6613
DNA (531bp) protein (177aa)
hypothetical protein id=131950 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25630.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_156_8
ACD80, SR1, Bacteria

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6614..6799
DNA (186bp) protein (62aa)
coiled-coil 17..38 id=131934 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Tax=ACD80
ar4r2_scaffold_156_9

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comp(6868..8880)
DNA (2013bp) protein (671aa)
peptidase, M23/M37 family id=131957 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Peptidase, M23/M37 family {ECO:0000313|EMBL:EKD25639.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
lipoprotein
ar4r2_scaffold_156_10

Not on your lists

comp(8929..10122)
DNA (1194bp) protein (398aa)
transmembrane_regions 158..180 id=131953 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25638.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_156_11

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comp(10131..10583)
DNA (453bp) protein (151aa)
HISTIDINE TRIAD id=131937 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25637.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
histidine triad (HIT) protein
ar4r2_scaffold_156_12
unknown

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10640..11104
DNA (465bp) protein (155aa)

This feature has no annotations

ar4r2_scaffold_156_13

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comp(11163..13568)
DNA (2406bp) protein (802aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD25635.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
coiled-coil 401..436 id=131952 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
viral A-type inclusion protein
ar4r2_scaffold_156_14

Not on your lists

14167..14997
DNA (831bp) protein (277aa)
sortase family protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20CB id=132716 bin=ACD80 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD80 organism_group=SR1 rbh
Sortase family protein {ECO:0000313|EMBL:EKD25273.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_156_15

Not on your lists

15139..16950
DNA (1812bp) protein (604aa)
Uncharacterized protein {ECO:0000313|EMBL:EKD25275.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ctc:CTC01060 lepA; GTP-binding protein LepA; K06207 GTP-binding protein id=132717 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
hypothetical protein
ar4r2_scaffold_156_16
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(16977..17186)
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=1826653 bin=GWE2_Bacteroidetes_40_15 species=Cellulophaga algicola genus=Cellulophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
membrane protein
Tax=GWD2_Bacteroidetes_33_33_curated
ar4r2_scaffold_156_17

Not on your lists


comp(17213..18712)
DNA (1500bp) protein (500aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Proline--tRNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XY35_9BACT rbh
hypothetical protein
ar4r2_scaffold_156_18
ACD80, SR1, Bacteria

Not on your lists

comp(18947..19273)
DNA (327bp) protein (109aa)
seg 2..19 id=132709 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Tax=ACD80
ar4r2_scaffold_156_19

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comp(19362..23477)
DNA (4116bp) protein (1372aa)
Isoleucyl-tRNA synthetase {ECO:0000313|EMBL:EKD25260.1}; EC=6.1.1.5 {ECO:0000313|EMBL:EKD25260.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
isoleucyl-tRNA synthetase (EC:6.1.1.5) id=132718 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Isoleucine-tRNA ligase
Displaying items 1-30 of 65 in total

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