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ar4r2_scaffold_346

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_346_1
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

3..389
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JVZ8_9FIRM
transposase IS200-family protein
Tax=CG_GN02-02
ar4r2_scaffold_346_2

Not on your lists

comp(446..925)
DNA (480bp) protein (160aa)
coiled-coil 104..143 id=131790 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24946.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
potassium channel protein
ar4r2_scaffold_346_3
unknown

Not on your lists

1063..2424
DNA (1362bp) protein (454aa)

This feature has no annotations

ar4r2_scaffold_346_4

Not on your lists

2523..3062
DNA (540bp) protein (180aa)
hypothetical protein id=131749 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24948.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_5

Not on your lists

3244..3981
DNA (738bp) protein (246aa)
hypothetical protein id=131725 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24949.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_346_6
ACD80, SR1, Bacteria

Not on your lists

4151..4333
DNA (183bp) protein (61aa)
seg 79..95 id=131844 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
hypothetical protein
Tax=ACD80
ar4r2_scaffold_346_7

Not on your lists

4393..4977
DNA (585bp) protein (195aa)
Transcription antitermination protein nusG n=1 Tax=Spiroplasma citri RepID=Q14PQ9_SPICI id=131839 bin=ACD80 species=Spiroplasma citri genus=Spiroplasma taxon_order=Entomoplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=ACD80 organism_group=SR1 rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_8

Not on your lists

5044..5727
DNA (684bp) protein (228aa)
seg 63..82 id=131747 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24952.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_9

Not on your lists


5735..6178
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=5 Tax=Clostridiales RepID=D4LI01_9FIRM id=131840 bin=ACD80 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD80 organism_group=SR1
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rplK; 50S ribosomal protein L11
ar4r2_scaffold_346_10

Not on your lists


6248..6922
DNA (675bp) protein (225aa)
50S ribosomal protein L1 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2U3_9FIRM id=131841 bin=ACD80 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=ACD80 organism_group=SR1 rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rplA; 50S ribosomal protein L1
ar4r2_scaffold_346_11

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comp(6988..7914)
DNA (927bp) protein (309aa)
seg 28..47 id=131838 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24867.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_12

Not on your lists

comp(7947..8567)
DNA (621bp) protein (207aa)
TPR-like id=131777 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24868.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_13

Not on your lists

comp(8711..9874)
DNA (1164bp) protein (388aa)
HtrA2 peptidase (EC:3.4.21.108)
Trypsin domain protein n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MSL3_9FIRM id=131842 bin=ACD80 species=Peptostreptococcus anaerobius genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD80 organism_group=SR1 rbh
Trypsin protein {ECO:0000313|EMBL:EKD24869.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_346_14

Not on your lists


comp(9929..12562)
DNA (2634bp) protein (878aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
dfe:Dfer_1029 DNA gyrase, A subunit (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=131843 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
hypothetical protein
ar4r2_scaffold_346_15

Not on your lists

13039..14757
DNA (1719bp) protein (573aa)
mmq:MmarC5_1145 sodium/hydrogen exchanger id=131845 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24872.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_16
unknown

Not on your lists

comp(14906..15586)
DNA (681bp) protein (227aa)

This feature has no annotations

ar4r2_scaffold_346_17
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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15729..16181
DNA (453bp) protein (151aa)
hypothetical protein id=5091221 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Uncharacterized protein {ECO:0000313|EMBL:KKP39736.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
hypothetical protein
ar4r2_scaffold_346_18
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(16319..17524)
DNA (1206bp) protein (402aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase id=4385771 bin=GWA2_OP3_53_43 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3 rbh
Tax=GWA2_WOR_2_47_8_curated
ar4r2_scaffold_346_19
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17654..18562
DNA (909bp) protein (303aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Succinivibrionaceae bacterium WG-1 RepID=UPI00025561D1 id=982682 bin=RAAC1_SR1 species=Succinivibrionaceae bacterium WG-1 genus=unknown taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC1_SR1 organism_group=SR1 rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
ar4r2_scaffold_346_20
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(18611..20107)
DNA (1497bp) protein (499aa)
Phytoene desaturase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGS8_THET1 rbh
phytoene desaturase rbh
Phytoene desaturase {ECO:0000313|EMBL:ACZ42949.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
ar4r2_scaffold_346_21
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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20240..21694
DNA (1455bp) protein (485aa)
Squalene/phytoene synthase n=2 Tax=Sulfolobus solfataricus RepID=D0KQA0_SULS9
Phytoene synthase {ECO:0000313|EMBL:KJR79120.1}; Squalene/phytoene synthase {ECO:0000313|EMBL:EWG06537.1}; TaxID=1326980 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; unclassified Sulfolobales.;" source="Sulfolobales archaeon AZ1.;"
squalene/phytoene synthase
ar4r2_scaffold_346_22

Not on your lists

comp(21743..22108)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1X440_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD24875.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_23

Not on your lists

comp(22312..24729)
DNA (2418bp) protein (806aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=131846 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24876.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Penicillin-binding protein, transpeptidase protein
ar4r2_scaffold_346_24

Not on your lists

25061..25453
DNA (393bp) protein (131aa)
seg 67..81 id=131763 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24877.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_25

Not on your lists

25647..28478
DNA (2832bp) protein (944aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00002518}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00002518};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
aas:Aasi_0650 hypothetical protein; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] id=131847 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
hypothetical protein
ar4r2_scaffold_346_26

Not on your lists

28484..29482
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YHN1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD24879.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_27

Not on your lists

29508..30899
DNA (1392bp) protein (464aa)
sugar transferase involved in lipopolysaccharide synthesis id=131812 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Sugar transferase involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:EKD24880.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_28

Not on your lists

30925..31539
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FZ15_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE27132.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_346_29

Not on your lists

31561..33711
DNA (2151bp) protein (717aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XI05_9BACT rbh
hypothetical protein
ar4r2_scaffold_346_30
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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33728..34072
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N1F6_9GAMM id=13309 bin=ACD18 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
Displaying items 1-30 of 83 in total

View Taxonomy