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gwa2_scaffold_210

Alias: GW2011_AR3_5

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Displaying items 1-30 of 103 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_210_1

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2..1360
DNA (1359bp) protein (453aa)
Glycyl-tRNA synthetase {ECO:0000313|EMBL:KHO46742.1}; EC=6.1.1.14 {ECO:0000313|EMBL:KHO46742.1};; Flags: Fragment;; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWW8_THEPD
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=1 to=360 evalue=1.2e-86)
gwa2_scaffold_210_2

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1568..2254
DNA (687bp) protein (229aa)
NEQ485 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MC1_NANEQ
Uncharacterized protein {ECO:0000313|EMBL:KHO46743.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=147 to=168 evalue=NA)
gwa2_scaffold_210_3

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comp(2363..2932)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46744.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwa2_scaffold_210_4

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comp(2985..3602)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46745.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=23 to=36)
gwa2_scaffold_210_5

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comp(3605..4201)
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46746.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=60 to=74)
gwa2_scaffold_210_6

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4363..4980
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) RepID=G4Z357_PHYSP
Uncharacterized protein {ECO:0000313|EMBL:KHO46747.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
haloacid dehalogenase
coiled-coil (db=Coil db_id=coil from=19 to=40 evalue=NA)
gwa2_scaffold_210_7

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5220..6008
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46748.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
gwa2_scaffold_210_8

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comp(6052..6219)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46749.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
gwa2_scaffold_210_9

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6522..8066
DNA (1545bp) protein (515aa)
Predicted ATPase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PWC6_METTM
Uncharacterized protein {ECO:0000313|EMBL:KHO46750.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATPase
(db=HMMPfam db_id=PF01935 from=131 to=348 evalue=2.7e-25 interpro_id=IPR002789 interpro_description=Domain of unknown function DUF87)
gwa2_scaffold_210_10

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8152..9378
DNA (1227bp) protein (409aa)
DNA double-strand break repair protein Mre11 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=MRE11_METTH
Uncharacterized protein {ECO:0000313|EMBL:KHO46751.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Metallophosphoesterase
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=6 to=267 evalue=1.9e-41)
gwa2_scaffold_210_11

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9627..11984
DNA (2358bp) protein (786aa)
Putative copper amine oxidase-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAK1_NITGG
Copper amine oxidase-like protein {ECO:0000313|EMBL:KHO46752.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
copper amine oxidase-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
gwa2_scaffold_210_12

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12079..12831
DNA (753bp) protein (251aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46753.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
gwa2_scaffold_210_13

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12924..13745
DNA (822bp) protein (274aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46754.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
gwa2_scaffold_210_14

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13812..14549
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46755.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=56)
gwa2_scaffold_210_15

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comp(14586..15851)
DNA (1266bp) protein (422aa)
Asparaginyl-tRNA synthetase {ECO:0000313|EMBL:KHO46756.1}; EC=6.1.1.22 {ECO:0000313|EMBL:KHO46756.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Asparaginyl-tRNA synthetase n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6KZ55_PICTO
Asparaginyl-tRNA synthetase
(db=HMMPfam db_id=PF00152 from=101 to=415 evalue=1.1e-78 interpro_id=IPR004364 interpro_description=Aminoacyl-tRNA synthetase, class II (D/K/N) GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
gwa2_scaffold_210_16

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comp(15948..16565)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46757.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
gwa2_scaffold_210_17

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16600..17049
DNA (450bp) protein (150aa)
Transcriptional regulator, AsnC family n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RW48_THEPD
AsnC family transcriptional regulator {ECO:0000313|EMBL:KHO46758.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transcriptional regulator, lrp family
seg (db=Seg db_id=seg from=41 to=51)
gwa2_scaffold_210_18

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17056..17442
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46759.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=66 to=82)
gwa2_scaffold_210_19

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comp(17454..17927)
DNA (474bp) protein (158aa)
Chromosome undetermined scaffold_12, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BP62_PARTE
Uncharacterized protein {ECO:0000313|EMBL:KHO46760.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
(db=HMMPfam db_id=PF04073 from=24 to=143 evalue=1.7e-32 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
gwa2_scaffold_210_20

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comp(17934..19253)
DNA (1320bp) protein (440aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHO46761.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KHO46761.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Aspartate--tRNA ligase n=2 Tax=Thermococcus RepID=F0LL77_THEBM
aspartyl-tRNA synthetase
seg (db=Seg db_id=seg from=302 to=316)
gwa2_scaffold_210_21

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comp(19302..19928)
DNA (627bp) protein (209aa)
Metal dependent hydrolase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGK9_THEYD
Metal dependent hydrolase {ECO:0000313|EMBL:KHO46762.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
metal dependent hydrolase
no description (db=HMMSmart db_id=SM00849 from=8 to=179 evalue=0.0018 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_210_22

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comp(19971..21692)
DNA (1722bp) protein (574aa)
putative N-acetylmuramoyl-L-alanine amidase AmpD (EC:3.5.1.28)
Negative regulator of beta-lactamase expression n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B382_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KHO46763.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
TAT_signal_seq: Tat (twin-arginine tra (db=HMMTigr db_id=TIGR01409 from=120 to=150 evalue=0.0078 interpro_id=IPR019546 interpro_description=Twin-arginine translocation pathway, signal sequence, bacterial/archaeal)
gwa2_scaffold_210_23

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comp(21729..22418)
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46764.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
seg (db=Seg db_id=seg from=79 to=92)
gwa2_scaffold_210_24

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comp(22415..22963)
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46765.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
seg (db=Seg db_id=seg from=50 to=63)
gwa2_scaffold_210_25

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23010..24146
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46766.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
seg (db=Seg db_id=seg from=331 to=344)
Aldolase (db=superfamily db_id=SSF51569 from=35 to=350 evalue=1.6e-16)
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=33 to=350 evalue=1.3e-12 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824))
gwa2_scaffold_210_26

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comp(24165..24884)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46767.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
gwa2_scaffold_210_27

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comp(24999..26081)
DNA (1083bp) protein (361aa)
Cell division protein FtsZ n=2 Tax=Candidatus Parvarchaeum RepID=D6GVI7_9EURY
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cell division protein FtsZ
FTSZ_2 (db=PatternScan db_id=PS01135 from=111 to=132 evalue=0.0 interpro_id=IPR020805 interpro_description=Cell division protein FtsZ, conserved site GO=Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737))
gwa2_scaffold_210_28

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comp(26329..27129)
DNA (801bp) protein (267aa)
Uncharacterized membrane protein n=1 Tax=nanoarchaeote Nst1 RepID=R1FUH2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KHO46769.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=36)
gwa2_scaffold_210_29

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comp(27322..28572)
DNA (1251bp) protein (417aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KHO46770.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
seg (db=Seg db_id=seg from=270 to=281)
gwa2_scaffold_210_30

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28625..29221
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46771.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
seg (db=Seg db_id=seg from=85 to=96)
Displaying items 1-30 of 103 in total

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