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gwf2_scaffold_336

Alias: PER_GWF2_39_17_6

Search features with annotation key words

Displaying items 31-60 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_336_31
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

34225..35424
DNA (1200bp) protein (400aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=PER_GWF2_39_17
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Thermodesulfobacterium sp. (strain OPB45) RepID=F8C415_THESO rbh
TRP_SYNTHASE_BETA (db=PatternScan db_id=PS00168 from=78 to=92 evalue=0.0 interpro_id=IPR006653 interpro_description=Tryptophan synthase, beta chain, conserved site GO=Molecular Function: tryptophan synthase activity (GO:0004834), Biological Process: tryptophan metabolic process (GO:0006568))
gwf2_scaffold_336_32
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

35436..36236
DNA (801bp) protein (267aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=PER_GWF2_39_17
trpA; Tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T2X1_9EURY
seg (db=Seg db_id=seg from=180 to=195)
gwf2_scaffold_336_33
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

36373..36804
DNA (432bp) protein (144aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=22 to=33)
gwf2_scaffold_336_34
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

36810..37466
DNA (657bp) protein (219aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_35
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

37622..37753
DNA (132bp) protein (44aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=21 to=42)
gwf2_scaffold_336_36
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

37845..38762
DNA (918bp) protein (306aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=77)
seg (db=Seg db_id=seg from=58 to=69)
gwf2_scaffold_336_37
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


38865..39410
DNA (546bp) protein (182aa)
50S ribosomal protein L7/L12 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A2
50S ribosomal protein L7/L12 Tax=PER_GWF2_39_17
50S ribosomal protein L7/L12
gwf2_scaffold_336_38
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

39470..40591
DNA (1122bp) protein (374aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
seg (db=Seg db_id=seg from=64 to=89)
gwf2_scaffold_336_39
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

40654..41709
DNA (1056bp) protein (352aa)
Twitching motility protein PilT n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBY3_DEFDS rbh
twitching motility protein PilT; K02669 twitching motility protein PilT Tax=PER_GWF2_39_17
twitching motility protein PilT
T2SP_E (db=PatternScan db_id=PS00662 from=195 to=209 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
gwf2_scaffold_336_40
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

41763..42179
DNA (417bp) protein (139aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_41
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

42273..42491
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQI0_METZD
hypothetical protein; K09779 hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwf2_scaffold_336_42
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

42779..43255
DNA (477bp) protein (159aa)
hypothetical protein cdivTM_30108 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00016B2684
hypothetical protein cdivTM_30108 Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=8 to=25)
gwf2_scaffold_336_43
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

43266..44021
DNA (756bp) protein (252aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=28)
seg (db=Seg db_id=seg from=17 to=27)
gwf2_scaffold_336_44
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

44023..44565
DNA (543bp) protein (181aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=42 to=52)
gwf2_scaffold_336_45
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

44575..45042
DNA (468bp) protein (156aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=16 to=28)
gwf2_scaffold_336_46
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

45054..45539
DNA (486bp) protein (162aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=8 to=22)
gwf2_scaffold_336_47
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(45626..47149)
DNA (1524bp) protein (508aa)
Methionyl-tRNA synthetase, methionyl-tRNA synthetase {ECO:0000313|EMBL:KKR08442.1}; EC=6.1.1.10 {ECO:0000313|EMBL:KKR08442.1};; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinib
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YV05_9THEM rbh
seg (db=Seg db_id=seg from=116 to=125)
gwf2_scaffold_336_48
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(47208..48134)
DNA (927bp) protein (309aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=26 to=39)
gwf2_scaffold_336_49
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(48140..48847)
DNA (708bp) protein (236aa)
Prepilin-type cleavage/methylation, N-terminal Tax=PER_GWF2_39_17
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=19 to=42 evalue=0.014 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Pili subunits (db=superfamily db_id=SSF54523 from=22 to=84 evalue=1.2e-08)
gwf2_scaffold_336_50
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(48872..49483)
DNA (612bp) protein (204aa)
Prepilin-type cleavage/methylation, N-terminal Tax=PER_GWF2_39_17
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=13 to=36 evalue=0.00013 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwf2_scaffold_336_51
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(49506..50153)
DNA (648bp) protein (216aa)
Prepilin-type cleavage/methylation, N-terminal Tax=PER_GWF2_39_17
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=17 to=40 evalue=0.0041 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
seg (db=Seg db_id=seg from=4 to=15)
gwf2_scaffold_336_52
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(50187..51368)
DNA (1182bp) protein (394aa)
Type II secretion system F domain protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8Y7_THEID
Type II secretion system F domain-containing protein, type IV pilus assembly protein PilC {ECO:0000313|EMBL:KKR24229.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
Type II secretion system F domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
gwf2_scaffold_336_53
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(51393..51935)
DNA (543bp) protein (181aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=10 to=28)
(db=HMMPfam db_id=PF10741 from=82 to=175 evalue=8.4e-08 interpro_id=IPR007690 interpro_description=General secretion pathway protein M GO=Biological Process: extracellular transport (GO:0006858))
gwf2_scaffold_336_54
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(51971..52528)
DNA (558bp) protein (186aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
seg (db=Seg db_id=seg from=54 to=68)
gwf2_scaffold_336_55
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

52704..53042
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WXE1_ALIAD
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
gwf2_scaffold_336_56
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

53080..53283
DNA (204bp) protein (68aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_336_57
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

53381..54574
DNA (1194bp) protein (398aa)
cell-cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=PER_GWF2_39_17
tRNA(Ile)-lysidine synthase n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U947_CROAH
cell-cycle protein
seg (db=Seg db_id=seg from=186 to=202)
gwf2_scaffold_336_58
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

54655..56523
DNA (1869bp) protein (623aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=PER_GWF2_39_17
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=uncultured candidate division JS1 bacterium RepID=G3BMI9_9BACT rbh
AAA (db=PatternScan db_id=PS00674 from=314 to=332 evalue=0.0 interpro_id=IPR003960 interpro_description=ATPase, AAA-type, conserved site GO=Molecular Function: ATP binding (GO:0005524))
gwf2_scaffold_336_59
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

56550..57011
DNA (462bp) protein (154aa)
Protein containing Heat shock protein Hsp20 domain n=1 Tax=sediment metagenome PF62_9ZZZZ">RepID=D9PF62_9ZZZZ
heat shock protein, Hsp20 family; K13993 HSP20 family protein Tax=PER_GWF2_39_17
heat-shock protein Hsp20
(db=HMMPfam db_id=PF00011 from=50 to=145 evalue=1.9e-13 interpro_id=IPR002068 interpro_description=Heat shock protein Hsp20)
gwf2_scaffold_336_60
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

57067..57963
DNA (897bp) protein (299aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=PER_GWF2_39_17
Glucose-1-phosphate uridylyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK76_9BACT rbh
UTP-glucose-1-phosphate uridylyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=7 to=279 evalue=1.2e-59)
Displaying items 31-60 of 85 in total

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