ggKbase home page

gwf2_scaffold_336_50

Organism: PER_GWF2_39_17

near complete RP 50 / 55 MC: 9 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(48872..49483)

Top 3 Functional Annotations

Value Algorithm Source
Prepilin-type cleavage/methylation, N-terminal Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 416
  • Evalue 1.60e-113
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=13 to=36 evalue=0.00013 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43) iprscan interpro
DB: TMHMM
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

PER_GWF2_39_17 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCTAGCTTCTAAAATAGATATGAAAATCAGAAAAAACTCAGCCTTTACTCTTATCGAAGTCATAATTGGCGTCGCTATTCTTAGCGTGGTTTTAACAGCCATGACCAGCTTAACTTTGAGTTCCATTAATGCCAATCAAGCTAATATCAACCGGCTTACTGCTTATTATTTGGCGCAGGAAGGACTCGAAGGGATGAGAAACATGCGTGATAGCAATTGGCTTCAAAATTATACCTATAATACTGGTGCTTCTTTTTGGGGAACGAATTTTGATCAAGATGGTTTTTATGTGCTTGATTATTTGCCAAGTAGGGGTAATTCCAGTTCTCCTTGGAAATTAGCTTATTTTAGCGATAAGGAAAATGAAGCCAGTGTTAATAGCTTACTTTACAGGGTAGAAGATAACTTTGGACATAATTTTTATCTGCATGACAGTTCTTTCGCAAGTAGTGTCCCATCTAATTTTCACCGCTATTTGCAAATTAGCAATGACCCTGATGCGCACGATTGGTTTGAGGTAAAAGCCGTTGTTTTCTGGGAGGATCACGGGGTAGAAAAAAAGATAGAAGTCAGCACTGATTTAGCTAATTGGCGCAAAGGGCCAATTTAA
PROTEIN sequence
Length: 204
MLASKIDMKIRKNSAFTLIEVIIGVAILSVVLTAMTSLTLSSINANQANINRLTAYYLAQEGLEGMRNMRDSNWLQNYTYNTGASFWGTNFDQDGFYVLDYLPSRGNSSSPWKLAYFSDKENEASVNSLLYRVEDNFGHNFYLHDSSFASSVPSNFHRYLQISNDPDAHDWFEVKAVVFWEDHGVEKKIEVSTDLANWRKGPI*