Alias: PER_GWF2_39_17_12
name | lists | location/seqs | annotations | notes |
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gwf2_scaffold_1143_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(160..531)
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seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=2 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
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gwf2_scaffold_1143_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(543..1439)
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mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=RSMH_DICT6
16S rRNA methyltransferase Tax=PER_GWF2_39_17
TIGR00006: S-adenosyl-methyltransferase Mra (db=HMMTigr db_id=TIGR00006 from=2 to=298 evalue=1.4e-104 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
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gwf2_scaffold_1143_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
1775..2257
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Small multidrug export protein n=2 Tax=Methanosarcina mazei RepID=M1QAH8_METMZ
small multi-drug export protein Tax=PER_GWF2_39_17
small multi-drug export protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
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gwf2_scaffold_1143_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(2314..2865)
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Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IF80_BEII9
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=PER_GWF2_39_17
translation factor Sua5
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gwf2_scaffold_1143_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(2923..3144)
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seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=9 to=24)
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gwf2_scaffold_1143_6
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria
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Not on your lists |
3290..4294
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Glyceraldehyde-3-phosphate dehydrogenase, glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:KKR24953.1}; EC=1.2.1.12 {ECO:0000313|EMBL:KKR24953.1};; TaxID=1619064 species="Bacteria; Peregrini
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Thermoanaerobacterium RepID=D9TNA3_THETC
rbh
seg (db=Seg db_id=seg from=196 to=202)
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gwf2_scaffold_1143_7
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(4305..4646)
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Tax=PER_GWF2_39_17
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gwf2_scaffold_1143_8
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
4778..5506
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Transcriptional regulator of heat shock gene n=2 Tax=Saccharobacteria RepID=UPI00016B2634
heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=85 to=99)
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gwf2_scaffold_1143_9
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
5534..6166
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Protein GrpE n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TP84_THETC
GrpE protein; K03687 molecular chaperone GrpE Tax=PER_GWF2_39_17
molecular chaperone GrpE (heat shock protein)
seg (db=Seg db_id=seg from=5 to=22)
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gwf2_scaffold_1143_10
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(6504..7499)
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S-CspCI protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XCX0_OXAFO
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF01420 from=5 to=136 evalue=2.9e-11 interpro_id=IPR000055 interpro_description=Restriction endonuclease, type I, HsdS GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA modification (GO:0006304))
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gwf2_scaffold_1143_11
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(7492..7713)
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Tax=PER_GWF2_39_17
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gwf2_scaffold_1143_12
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(7703..9562)
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N-6 DNA Methylase family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG66_ACIB4
rbh
N-6 DNA methylase Tax=PER_GWF2_39_17
N-6 DNA methylase
seg (db=Seg db_id=seg from=36 to=49)
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gwf2_scaffold_1143_13
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria
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Not on your lists |
comp(9569..10201)
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Uncharacterized protein {ECO:0000313|EMBL:KKR24946.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=76 to=207 evalue=3.4e-10 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=69 to=207 evalue=8.8e-14 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
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gwf2_scaffold_1143_14
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
10334..10624
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Excinuclease ABC, C subunit, N-terminal Tax=PER_GWF2_39_17
(db=HMMPfam db_id=PF01541 from=23 to=91 evalue=3.8e-05 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
COX2_CUA (db=ProfileScan db_id=PS50857 from=1 to=96 evalue=8.581 interpro_id=IPR002429 interpro_description=Cytochrome c oxidase subunit II C-terminal GO=Molecular Function: cytochrome-c oxidase activity (GO:0004129), Molecular Function: copper ion binding (GO:0005507), Cellular Component: membrane (GO:0016020))
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gwf2_scaffold_1143_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
10886..12808
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Chaperone protein DnaK n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W4N3_DESIS
rbh
chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=PER_GWF2_39_17
chaperone protein DnaK
seg (db=Seg db_id=seg from=177 to=187)
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gwf2_scaffold_1143_16
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria
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Not on your lists |
12889..14193
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Seryl-tRNA synthetase, seryl-tRNA synthetase {ECO:0000313|EMBL:KKR24942.1}; EC=6.1.1.11 {ECO:0000313|EMBL:KKR24942.1};; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y273_THEBD
rbh
coiled-coil (db=Coil db_id=coil from=31 to=52 evalue=NA)
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gwf2_scaffold_1143_17
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
comp(14177..14827)
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seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=102 to=114)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=5.0)
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gwf2_scaffold_1143_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
14987..15730
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Uncharacterized protein {ECO:0000313|EMBL:KKR07775.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
Xylose isomerase-like (db=superfamily db_id=SSF51658 from=5 to=246 evalue=1.5e-21 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
no description (db=Gene3D db_id=G3DSA:3.20.20.150 from=11 to=218 evalue=2.5e-10 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
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gwf2_scaffold_1143_19
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria
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Not on your lists |
16136..19699
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DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKR25910.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KKR25910.1};; TaxID=1619064 species="Bacteria; Peregrinib
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2J8_SPHTD
rbh
DNA-directed RNA polymerase subunit beta
seg (db=Seg db_id=seg from=4 to=29)
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gwf2_scaffold_1143_20
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
19769..20284
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Single-stranded DNA-binding protein n=2 Tax=Methylotenera RepID=D7DNA2_METS0
single-strand-binding protein; K03111 single-strand DNA-binding protein Tax=PER_GWF2_39_17
hypothetical protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=2 to=147 evalue=1.7e-41 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
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gwf2_scaffold_1143_21
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
20330..24154
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DNA-directed RNA polymerase subunit beta', DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKR07778.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KKR07778.1};; TaxID=1619067 species="Bacteria; Peregrini
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=8 Tax=Dehalococcoides mccartyi RepID=RPOC_DEHSC
rbh
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=13 to=1261 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
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gwf2_scaffold_1143_22
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria
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Not on your lists |
24242..24658
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30S ribosomal protein S12 n=1 Tax=Mesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1) RepID=RS12_MESFL
30S ribosomal protein S12, small subunit ribosomal protein S12 {ECO:0000313|EMBL:KKR25907.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6
rpsL; 30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1143_23
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria
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Not on your lists |
24702..25160
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30S ribosomal protein S7 n=1 Tax=Alkalilimnicola ehrlichei (strain MLHE-1) RepID=RS7_ALHEH
30S ribosomal protein S7, small subunit ribosomal protein S7 {ECO:0000313|EMBL:KKR25906.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;
30S ribosomal protein S7
RIBOSOMAL_S7 (db=PatternScan db_id=PS00052 from=15 to=41 evalue=0.0 interpro_id=IPR020606 interpro_description=Ribosomal protein S7, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1143_24
PER_GWF2_39_17, Peregrinibacteria, Bacteria
|
Not on your lists |
25147..25620
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Tax=PER_GWF2_39_17
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gwf2_scaffold_1143_25
PER_GWF2_39_17, Peregrinibacteria, Bacteria
|
Not on your lists |
25685..26218
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seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=2 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
coiled-coil (db=Coil db_id=coil from=82 to=103 evalue=NA)
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gwf2_scaffold_1143_26
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
26363..28468
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Elongation factor G n=1 Tax=Leptonema illini DSM 21528 RepID=H2CAM3_9LEPT
rbh
translation elongation factor G; K02355 elongation factor G Tax=PER_GWF2_39_17
translation elongation factor G
seg (db=Seg db_id=seg from=496 to=501)
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gwf2_scaffold_1143_27
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
28629..29822
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Elongation factor Tu n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W252_DESIS
rbh
translation elongation factor Tu; K02358 elongation factor Tu Tax=PER_GWF2_39_17
translation elongation factor Tu
seg (db=Seg db_id=seg from=23 to=37)
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gwf2_scaffold_1143_28
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
30175..30516
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30S ribosomal protein S10 n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1C1_DEHLB
30S ribosomal protein S10, small subunit ribosomal protein S10 {ECO:0000313|EMBL:KKR07785.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_1
30S ribosomal protein S10
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=37 to=52 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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gwf2_scaffold_1143_29
PER_GWF2_39_17, Peregrinibacteria, Bacteria
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Not on your lists |
30682..31269
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50S ribosomal protein L3 n=13 Tax=Thermoanaerobacteraceae RepID=RL3_THEP3
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=PER_GWF2_39_17
rplC; 50S ribosomal protein L3
seg (db=Seg db_id=seg from=115 to=129)
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gwf2_scaffold_1143_30
PER_GWF2_39_17, Peregrinibacteria, Bacteria
|
Not on your lists |
31285..31929
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50S ribosomal protein L4 n=3 Tax=Parvimonas RepID=A8SND4_9FIRM
50S ribosomal protein L4, large subunit ribosomal protein L4 {ECO:0000313|EMBL:KKR07787.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.
50S ribosomal protein L4
seg (db=Seg db_id=seg from=52 to=61)
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