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gwf1_scaffold_1663

Alias: WS6_GWF1_33_233_12

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf1_scaffold_1663_1

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comp(3..1271)
DNA (1269bp) protein (423aa)
enolase (EC:4.2.1.11)
Enolase n=8 Tax=Lactobacillus RepID=F4FWX9_LACBN rbh
Enolase {ECO:0000313|EMBL:KKP54562.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
ENOLASE (db=PatternScan db_id=PS00164 from=346 to=359 evalue=0.0 interpro_id=IPR020809 interpro_description=Enolase, conserved site GO=Cellular Component: phosphopyruvate hydratase complex (GO:0000015), Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phosphopyruvate hydratase activity (GO:0004634), Biological Process: glycolysis (GO:0006096))
gwf1_scaffold_1663_2

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1599..2087
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54563.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
seg (db=Seg db_id=seg from=61 to=76)
gwf1_scaffold_1663_3
WS6_GWF1_33_233, WS6, Bacteria

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comp(2084..2842)
DNA (759bp) protein (253aa)
RNA methylase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8RW96_MICSL
RNA methylase {ECO:0000313|EMBL:KKP45026.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
RNA methylase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=14 to=238 evalue=2.6e-21)
gwf1_scaffold_1663_4

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2919..3104
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54565.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=27 to=46)
gwf1_scaffold_1663_5
WS6_GWF1_33_233, WS6, Bacteria

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comp(3190..3657)
DNA (468bp) protein (156aa)
Large-conductance mechanosensitive channel n=3 Tax=Desulfitobacterium hafniense RepID=MSCL_DESHD
Large-conductance mechanosensitive channel, large conductance mechanosensitive channel {ECO:0000313|EMBL:KKP45028.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate divis
mscL; large-conductance mechanosensitive channel
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=38)
gwf1_scaffold_1663_6
WS6_GWF1_33_233, WS6, Bacteria

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comp(3629..4870)
DNA (1242bp) protein (414aa)
polysaccharide biosynthesis protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248E8EE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKP45029.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=61 to=72)
gwf1_scaffold_1663_7

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4935..6101
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V5I2_THELD
Uncharacterized protein {ECO:0000313|EMBL:KKP54568.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=22)
gwf1_scaffold_1663_8

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comp(6148..6843)
DNA (696bp) protein (232aa)
Putative uncharacterized protein n=1 Tax=Fischerella sp. JSC-11 RepID=G6FRT2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKP54569.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=154 to=176)
gwf1_scaffold_1663_9

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6959..7543
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54570.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=79 to=93)
gwf1_scaffold_1663_10
WS6_GWF1_33_233, WS6, Bacteria

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7633..8658
DNA (1026bp) protein (342aa)
Protein RecA n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMV0_9FIRM rbh
Recombinase A, recombination protein RecA {ECO:0000313|EMBL:KKP45033.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
protein RecA
RECA_1 (db=PatternScan db_id=PS00321 from=227 to=235 evalue=0.0 interpro_id=IPR020584 interpro_description=DNA recombination/repair protein RecA, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA metabolic process (GO:0006259), Molecular Function: DNA-dependent ATPase activity (GO:0008094))
gwf1_scaffold_1663_11
WS6_GWF1_33_233, WS6, Bacteria

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8659..9312
DNA (654bp) protein (218aa)
Regulatory protein RecX n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QN47_9BACI
Regulatory protein RecX, regulatory protein {ECO:0000313|EMBL:KKP45034.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
regulatory protein RecX
(db=HMMPfam db_id=PF02631 from=107 to=212 evalue=2.4e-23 interpro_id=IPR003783 interpro_description=Regulatory protein RecX GO=Biological Process: regulation of DNA repair (GO:0006282))
gwf1_scaffold_1663_12

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9296..10993
DNA (1698bp) protein (566aa)
exonuclease RecJ (EC:3.1.-.-)
Exonuclease RecJ n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M330_CLOCD rbh
Exonuclease RecJ {ECO:0000313|EMBL:KKP54573.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=43 to=453 evalue=4.6e-92)
gwf1_scaffold_1663_13
WS6_GWC1_33_20, WS6, Bacteria

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comp(10986..12371)
DNA (1386bp) protein (462aa)
tRNA synthetase class II (D K and N), aspartyl-tRNA synthetase {ECO:0000313|EMBL:KKP44091.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KKP44091.1};; TaxID=1619089 species="Bacteria; candidate division WS6.;" sou
tRNA synthetase class II (D K and N) n=2 Tax=Ruminococcus albus RepID=E6UAF2_RUMA7 rbh
hypothetical protein
seg (db=Seg db_id=seg from=28 to=39)
gwf1_scaffold_1663_14
WS6_GWF1_33_233, WS6, Bacteria

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12475..12813
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45037.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
seg (db=Seg db_id=seg from=30 to=47)
gwf1_scaffold_1663_15
WS6_GWF1_33_233, WS6, Bacteria

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12948..13466
DNA (519bp) protein (173aa)
Serine-type D-Ala-D-Ala carboxypeptidase, D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 5/6) {ECO:0000313|EMBL:KKP45038.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KKP45038.1};; TaxID=1619096
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Protein containing Peptidase S11, D-alanyl-D-alanine carboxypeptidase A domain n=1 Tax=sediment metagenome RepID=D9PKA1_9ZZZZ
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=2 to=169 evalue=1.4e-28 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
gwf1_scaffold_1663_16

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comp(13458..14765)
DNA (1308bp) protein (436aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54576.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=13 to=32)
gwf1_scaffold_1663_17
WS6_GWF1_33_233, WS6, Bacteria

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14827..16494
DNA (1668bp) protein (556aa)
Glutamyl-tRNA synthetase, glutamyl-tRNA synthetase {ECO:0000313|EMBL:KKP45040.1}; EC=6.1.1.17 {ECO:0000313|EMBL:KKP45040.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candida
gltX; Glutamate-tRNA ligase (EC:6.1.1.17)
UPI00019B08AF related cluster n=1 Tax=unknown RepID=UPI00019B08AF rbh
seg (db=Seg db_id=seg from=439 to=448)
gwf1_scaffold_1663_18

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comp(16586..16843)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54578.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwf1_scaffold_1663_19
WS6_GWF1_33_233, WS6, Bacteria

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comp(16845..17117)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) RepID=C7RHQ5_ANAPD
Uncharacterized protein {ECO:0000313|EMBL:KKP45042.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
(db=HMMPfam db_id=PF02583 from=3 to=84 evalue=4.4e-15 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
gwf1_scaffold_1663_20
GWD1_WS6_35_594, WS6, Bacteria

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comp(17136..18143)
DNA (1008bp) protein (336aa)
Heavy metal transport/detoxification protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I7W6_CLOCE
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:KKP81870.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
COPPER TRANSPORT PROTEIN ATOX1-RELATED (db=HMMPanther db_id=PTHR22814 from=11 to=63 evalue=0.00027)
gwf1_scaffold_1663_21
GWD1_WS6_35_594, WS6, Bacteria

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comp(18145..20382)
DNA (2238bp) protein (746aa)
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YT77_9CHLB rbh
ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KKP81871.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidat
heavy metal translocating P-type ATPase
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=108)
gwf1_scaffold_1663_22
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(20390..20794)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SB91_MICSL
Uncharacterized protein {ECO:0000313|EMBL:KKP81872.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
gwf1_scaffold_1663_23

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20936..21235
DNA (300bp) protein (100aa)
Phage shock protein C, PspC n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TNL0_THETC
Phage shock protein C, PspC {ECO:0000313|EMBL:KKP54583.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
putative stress-responsive transcriptional regulator
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
gwf1_scaffold_1663_24
WS6_GWF1_33_233, WS6, Bacteria

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21259..21591
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45047.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=34)
seg (db=Seg db_id=seg from=48 to=61)
gwf1_scaffold_1663_25
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

21564..22064
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP45048.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=119 to=131)
gwf1_scaffold_1663_26

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22082..22234
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54585.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=21)
Displaying 26 items

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