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gwe1_scaffold_1581

Alias: GWE1_WS6_33_547_17

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_1581_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(3..1079)
DNA (1077bp) protein (359aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44856.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
seg (db=Seg db_id=seg from=103 to=120)
Fibronectin type III (db=superfamily db_id=SSF49265 from=133 to=239 evalue=9.5e-09 interpro_id=IPR003961 interpro_description=Fibronectin, type III GO=Molecular Function: protein binding (GO:0005515))
FN3 (db=ProfileScan db_id=PS50853 from=143 to=232 evalue=11.363 interpro_id=IPR003961 interpro_description=Fibronectin, type III GO=Molecular Function: protein binding (GO:0005515))
gwe1_scaffold_1581_2
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(1082..1699)
DNA (618bp) protein (206aa)
DNA repair protein RecO n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZJ7_DEHLB
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFOXYB1_FULL_WS6_33_15_curated
hypothetical protein
(db=HMMPfam db_id=PF11967 from=1 to=75 evalue=2.2e-15 interpro_id=IPR022572 interpro_description=DNA replication/recombination mediator RecO, N-terminal)
gwe1_scaffold_1581_3
WS6_GWF1_33_233, WS6, Bacteria

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comp(1711..2886)
DNA (1176bp) protein (392aa)
Glycosyl transferase group 1 n=1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S805_CALKI
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKP44858.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
glycosyl transferase group 1
coiled-coil (db=Coil db_id=coil from=246 to=267 evalue=NA)
gwe1_scaffold_1581_4

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comp(2980..3462)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55032.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=139 to=160)
gwe1_scaffold_1581_5
WS6_GWC1_33_20, WS6, Bacteria

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comp(3654..6593)
DNA (2940bp) protein (980aa)
Protein translocase subunit SecA n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=SECA_FERNB rbh
Preprotein translocase subunit SecA, preprotein translocase subunit SecA {ECO:0000313|EMBL:KKP43811.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacter
preprotein translocase subunit SecA
SECA (db=PatternScan db_id=PS01312 from=547 to=562 evalue=0.0 interpro_id=IPR020937 interpro_description=SecA conserved site GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
gwe1_scaffold_1581_6
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

6679..8154
DNA (1476bp) protein (492aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R8B6_THETN
Membrane protein metalloendopeptidase {ECO:0000313|EMBL:KKP44861.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
NlpD5; metalloendopeptidase-like membrane protein
seg (db=Seg db_id=seg from=30 to=40)
gwe1_scaffold_1581_7
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

8164..8796
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP44862.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
gwe1_scaffold_1581_8
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(8737..9921)
DNA (1185bp) protein (395aa)
Glycosyl transferase group 1 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1I1_9CLOT
Mannosyltransferase {ECO:0000313|EMBL:KKP44863.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
glycosyl transferase group 1
seg (db=Seg db_id=seg from=331 to=342)
gwe1_scaffold_1581_9

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comp(9962..10444)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFD2_THEPJ
Uncharacterized protein {ECO:0000313|EMBL:KKP55037.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwe1_scaffold_1581_10

Not on your lists

comp(10448..10603)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP55038.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
gwe1_scaffold_1581_11
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(10687..11256)
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFOXYB1_FULL_WS6_33_15_curated
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PUU5_9BACT
coiled-coil (db=Coil db_id=coil from=167 to=179 evalue=NA)
gwe1_scaffold_1581_12
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(11258..11827)
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1K0_DESTD
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:KKP81983.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
(db=HMMPfam db_id=PF00908 from=4 to=177 evalue=1.9e-69 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase-related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
gwe1_scaffold_1581_13
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(11845..12933)
DNA (1089bp) protein (363aa)
Glucose-1-phosphate thymidylyltransferase, glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:KKP44867.1}; EC=2.7.7.24 {ECO:0000313|EMBL:KKP44867.1};; TaxID=1619096 species="Bacteria; candida
Glucose-1-phosphate thymidyltransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRM7_9BACT
glucose-1-phosphate thymidylyltransferase
seg (db=Seg db_id=seg from=37 to=57)
gwe1_scaffold_1581_14

Not on your lists

comp(12951..13952)
DNA (1002bp) protein (334aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=2 Tax=unclassified Erysipelotrichaceae RepID=B7C7G6_9FIRM rbh
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KKP55042.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=267 evalue=1.8e-69 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
Displaying 14 items

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