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gwe1_scaffold_1958

Alias: GWE1_WS6_33_547_23

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwe1_scaffold_1958_1
WS6_GWF1_33_233, WS6, Bacteria

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comp(2..427)
DNA (426bp) protein (142aa)
ATP-dependent DNA helicase PcrA, DNA helicase II / ATP-dependent DNA helicase PcrA {ECO:0000313|EMBL:KKP46118.1}; EC=3.6.1.- {ECO:0000313|EMBL:KKP46118.1};; EC=3.6.4.12 {ECO:0000313|EMBL:KKP46118.1};;
ATP-dependent DNA helicase pcrA n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCT8_FUSMR
coiled-coil (db=Coil db_id=coil from=117 to=138 evalue=NA)
seg (db=Seg db_id=seg from=122 to=133)
gwe1_scaffold_1958_2
GWD1_WS6_35_594, WS6, Bacteria

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comp(424..1596)
DNA (1173bp) protein (391aa)
ATP-dependent DNA helicase PcrA n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I7K0_9BACL rbh
ATP-dependent DNA helicase PcrA {ECO:0000313|EMBL:KKP82013.1}; Flags: Fragment;; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.
ATP-dependent DNA helicase PcrA
seg (db=Seg db_id=seg from=79 to=93)
gwe1_scaffold_1958_3

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comp(1674..2861)
DNA (1188bp) protein (396aa)
N-acetylmuramoyl-L-alanine amidase family 2 {ECO:0000313|EMBL:KKP54671.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
seg (db=Seg db_id=seg from=3 to=21)
(db=HMMPfam db_id=PF08239 from=354 to=391 evalue=2.6e-05 interpro_id=IPR013247 interpro_description=SH3, type 3)
N-acetylmuramoyl-L-alanine amidase-like (db=superfamily db_id=SSF55846 from=26 to=105 evalue=5.9e-06 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase domain GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
gwe1_scaffold_1958_4

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comp(2886..3839)
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54672.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
seg (db=Seg db_id=seg from=9 to=27)
gwe1_scaffold_1958_5
WS6_GWF1_33_233, WS6, Bacteria

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comp(3861..6551)
DNA (2691bp) protein (897aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP46115.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
coiled-coil (db=Coil db_id=coil from=315 to=336 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=631 to=653)
seg (db=Seg db_id=seg from=492 to=503)
gwe1_scaffold_1958_6
WS6_GWF1_33_233, WS6, Bacteria

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comp(6559..8076)
DNA (1518bp) protein (506aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP46114.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
seg (db=Seg db_id=seg from=240 to=253)
gwe1_scaffold_1958_7

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comp(8099..9460)
DNA (1362bp) protein (454aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP54676.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
seg (db=Seg db_id=seg from=46 to=61)
Displaying 7 items

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