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cg_0.2_sub10_scaffold_436_c

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_436_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

42..230
DNA (189bp) protein (63aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_436_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

297..560
DNA (264bp) protein (88aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_436_c_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

786..1202
DNA (417bp) protein (139aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_436_c_trna_1
unknown

Not on your lists

comp(1276..1348)
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_436_c_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1507..2292
DNA (786bp) protein (262aa)
hypothetical protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12] Tax=CG_GN02-01
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
cg_0.2_sub10_scaffold_436_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

2344..3435
DNA (1092bp) protein (364aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=CG_GN02-01
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DNA polymerase III subunit epsilon (EC:2.7.7.7)
cg_0.2_sub10_scaffold_436_c_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

3550..4251
DNA (702bp) protein (234aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] Tax=ACD78
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DNA polymerase III subunit epsilon
cg_0.2_sub10_scaffold_436_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4402..4962
DNA (561bp) protein (187aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YAA4_9BACT rbh
Uncharacterized protein (Fragment) Tax=CG_GN02-01
cg_0.2_sub10_scaffold_436_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

5262..5987
DNA (726bp) protein (242aa)
transmembrane_regions 12..34 Tax=CG_GN02-01
transmembrane_regions 12..34 id=124607 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_436_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6078..6437
DNA (360bp) protein (120aa)
transmembrane_regions 12..34 Tax=CG_GN02-01
transmembrane_regions 12..34 id=124607 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_436_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6468..6812
DNA (345bp) protein (115aa)
type II secretion system protein E n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B26A3 id=124605 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=CG_GN02-01
xcpR; type II secretion system protein E
cg_0.2_sub10_scaffold_436_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6825..7592
DNA (768bp) protein (256aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_GN02-01
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E id=123617 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein
cg_0.2_sub10_scaffold_436_c_12
ACD78, Gracilibacteria, Bacteria

Not on your lists

7635..7724
DNA (90bp) protein (30aa)
pmx:PERMA_0824 general secretion pathway protein E (type II traffic warden ATPase)(cholera toxin secretion protein EpsE); K02454 general secretion pathway protein E Tax=ACD78
cg_0.2_sub10_scaffold_436_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

7842..8984
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BCN0_9BACT rbh
Type II secretion system protein Tax=CG_GN02-01
Type II secretion system protein
cg_0.2_sub10_scaffold_436_c_14
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(9158..9532)
DNA (375bp) protein (125aa)
tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; K07056 Tax=ACD78
tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; K07056 id=124303 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
putative S-adenosylmethionine-dependent methyltransferase, YraL family
cg_0.2_sub10_scaffold_436_c_15
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(9698..9811)
DNA (114bp) protein (38aa)
tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; K07056 id=124303 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; K07056 Tax=ACD78
methyltransferase
cg_0.2_sub10_scaffold_436_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9850..10872)
DNA (1023bp) protein (341aa)
Adenylate/guanylate cyclase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GYR4_9BACT rbh
family 3 adenylate cyclase Tax=CG_GN02-01
family 3 adenylate cyclase
cg_0.2_sub10_scaffold_436_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(11386..11850)
DNA (465bp) protein (155aa)
transmembrane_regions 4..26 Tax=CG_GN02-01
transmembrane_regions 4..26 id=124567 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_436_c_18
unknown

Not on your lists

comp(12164..12388)
DNA (225bp) protein (75aa)

This feature has no annotations

cg_0.2_sub10_scaffold_436_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12456..12662
DNA (207bp) protein (69aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_436_c_20
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

12702..12953
DNA (252bp) protein (84aa)
transmembrane_regions 243..265 Tax=CG_GN02-02
transmembrane_regions 243..265 id=124296 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_436_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12954..13352
DNA (399bp) protein (133aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_436_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

13440..13907
DNA (468bp) protein (156aa)
hydrolase; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=CG_GN02-01
Hydrolase, NUDIX family n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LU03_9FIRM id=68876 bin=ACD49 species=Megasphaera genomosp. type_1 genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
NUDIX hydrolase
cg_0.2_sub10_scaffold_436_c_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

13936..14211
DNA (276bp) protein (92aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XHU8_9BACT rbh
ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=CG_GN02-01
ABC transporter ATP-binding protein
cg_0.2_sub10_scaffold_436_c_24
unknown

Not on your lists

14257..14373
DNA (117bp) protein (39aa)

This feature has no annotations

cg_0.2_sub10_scaffold_436_c_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

14566..15087
DNA (522bp) protein (174aa)
ATP-binding subunit of unknown ABC transporter Tax=CG_GN02-01
ABC transporter related protein; K06158 ATP-binding cassette, sub-family F, member 3 id=69366 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ABC transporter-like protein
cg_0.2_sub10_scaffold_436_c_26
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

15112..15396
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G1F2_9BACT
ABC transporter ATPase component; K06158 ATP-binding cassette, subfamily F, member 3 Tax=CG_GN02-01
ABC-type transport system, ATPase component
cg_0.2_sub10_scaffold_436_c_27
unknown

Not on your lists

comp(16595..16828)
DNA (234bp) protein (78aa)

This feature has no annotations

cg_0.2_sub10_scaffold_436_c_28
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(17667..17903)
DNA (237bp) protein (79aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=CG_GN02-01
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Thermocrinis albus DSM 14484 RepID=D3SMC3_THEAH id=124771 bin=ACD78 species=Thermocrinis albus genus=Thermocrinis taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_436_c_29
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(18000..18704)
DNA (705bp) protein (235aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=CG_GN02-01
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Thermocrinis albus DSM 14484 RepID=D3SMC3_THEAH id=124771 bin=ACD78 species=Thermocrinis albus genus=Thermocrinis taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Displaying items 1-30 of 37 in total

View Taxonomy