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cg2_3.0_scaffold_2553_c

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2553_c_1
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1N8_9BACT rbh
hypothetical protein; K09125 hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
cg2_3.0_scaffold_2553_c_2
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

133..1701
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035D7D5B rbh
hypothetical protein
hypothetical protein Tax=CG_Kuenen_02
cg2_3.0_scaffold_2553_c_3
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

1698..2387
DNA (690bp) protein (230aa)
Glycosyl transferase family 2 n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FHY3_DESAA
family 2 glycosyl transferase Tax=CG_Kuenen_02
family 2 glycosyl transferase
cg2_3.0_scaffold_2553_c_4
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

2456..2947
DNA (492bp) protein (164aa)
transmembrane_regions Tax=CG_Kuenen_02
transmembrane_regions id=5801296 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg2_3.0_scaffold_2553_c_trna_1
unknown

Not on your lists

3009..3080
DNA (72bp)
transferRNA
cg2_3.0_scaffold_2553_c_5
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

3252..3563
DNA (312bp) protein (104aa)
putative RNA-binding protein RbpA Tax=CG_Kuenen_02
RNA-binding proteins (RRM domain) id=5802739 bin=PER_GWA2_38_35 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) rbh
putative RNA-binding protein RbpA
cg2_3.0_scaffold_2553_c_6
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

3640..4116
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036E3B2D rbh
hypothetical protein Tax=CG_Kuenen_02
hypothetical protein
cg2_3.0_scaffold_2553_c_7
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

4393..4584
DNA (192bp) protein (64aa)
infA; translation initiation factor IF-1 Tax=CG_Kuenen_02
infA; translation initiation factor IF-1
cg2_3.0_scaffold_2553_c_8
GWC2_OD1_45_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4603..4716
DNA (114bp) protein (38aa)
50S ribosomal protein L36, chloroplastic n=1 Tax=Chlorokybus atmophyticus RepID=RK36_CHLAT id=68076 bin=ACD48 species=Chlorokybus atmophyticus genus=Chlorokybus taxon_order=Chlorokybales taxon_class=Chlorokybophyceae phylum=Streptophyta tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11 rbh
50S ribosomal protein L36 chloroplastic {ECO:0000313|EMBL:KKU14107.1}; TaxID=1619050 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_45_8.;"
rpmJ; 50S ribosomal protein L36
cg2_3.0_scaffold_2553_c_9
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists


4822..5211
DNA (390bp) protein (130aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Kuenen_02
hypothetical protein id=5801916 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
30S ribosomal protein S13
cg2_3.0_scaffold_2553_c_10
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists


5249..5659
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=uncultured bacterium RepID=K1ZIL0_9BACT rbh
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Kuenen_02
30S ribosomal protein S11
cg2_3.0_scaffold_2553_c_11
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists


5676..6308
DNA (633bp) protein (211aa)
30S ribosomal protein S4 n=1 Tax=uncultured bacterium RepID=K1ZZM6_9BACT rbh
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Kuenen_02
30S ribosomal protein S4
cg2_3.0_scaffold_2553_c_12
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

6348..7202
DNA (855bp) protein (285aa)
rpoA; DNA-directed RNA polymerase alpha subunit RpoA (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=CG_Kuenen_02
rpoA; DNA-directed RNA polymerase alpha subunit RpoA (EC:2.7.7.6)
cg2_3.0_scaffold_2553_c_13
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists


7221..7574
DNA (354bp) protein (118aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=CG_Kuenen_02
hypothetical protein id=5801920 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
50S ribosomal protein L17
cg2_3.0_scaffold_2553_c_14
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists


7587..7937
DNA (351bp) protein (117aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=CG_Kuenen_02
50S ribosomal protein L13
cg2_3.0_scaffold_2553_c_15
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists


7937..8371
DNA (435bp) protein (145aa)
30S ribosomal protein S9 n=2 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B66502 rbh
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Kuenen_02
30S ribosomal protein S9
cg2_3.0_scaffold_2553_c_16
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

8442..10175
DNA (1734bp) protein (578aa)
Putative membrane protein Tax=CG_Kuenen_02
cg2_3.0_scaffold_2553_c_17
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

10172..10798
DNA (627bp) protein (209aa)
Tax=CG_Kuenen_02
cg2_3.0_scaffold_2553_c_18
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

10785..10976
DNA (192bp) protein (64aa)
Tax=CG_Kuenen_02
cg2_3.0_scaffold_2553_c_19
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

10954..11370
DNA (417bp) protein (139aa)
hypothetical protein; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Kuenen_02
dTDP-4-dehydrorhamnose 3,5-epimerase-related enzyme
cg2_3.0_scaffold_2553_c_20
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

11377..12291
DNA (915bp) protein (305aa)
seg Tax=CG_Kuenen_02
seg id=5801745 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg2_3.0_scaffold_2553_c_21
R_OD1_Falkowbacteria_39_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12503..13003)
DNA (501bp) protein (167aa)
transmembrane_regions Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_13_curated
transmembrane_regions id=5801418 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A rbh
cg2_3.0_scaffold_2553_c_22
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

13085..14137
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000378237A rbh
group 1 glycosyl transferase Tax=CG_Kuenen_02
group 1 glycosyl transferase
cg2_3.0_scaffold_2553_c_23
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

14127..14963
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI0003499DAA rbh
hypothetical protein Tax=CG_Kuenen_02
hypothetical protein
cg2_3.0_scaffold_2553_c_24
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

14960..15805
DNA (846bp) protein (282aa)
dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Kuenen_02
dTDP-4-dehydrorhamnose reductase
cg2_3.0_scaffold_2553_c_25
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

15823..16890
DNA (1068bp) protein (356aa)
Glycosyltransferase (EC:2.4.1.-)
group 1 glycosyl transferase Tax=CG_Kuenen_02
group 1 glycosyl transferase id=5803049 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg2_3.0_scaffold_2553_c_26
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

16887..17546
DNA (660bp) protein (220aa)
Methyltransferase type 11 n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TAU7_METSL rbh
type 11 methyltransferase Tax=CG_Kuenen_02
type 11 methyltransferase
cg2_3.0_scaffold_2553_c_27
CG_Kuenen_01, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

17602..18018
DNA (417bp) protein (139aa)
group 1 glycosyl transferase Tax=CG_Kuenen_01
Displaying 28 items

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