ggKbase home page

cg_3.0_sub10_scaffold_410_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_3.0_sub10_scaffold_410_c_1
R_OD1_Moranbacteria_54_31, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..250)
DNA (249bp) protein (83aa)
Lig; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_54_31_curated
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=137427 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i rbh
NAD-dependent DNA ligase
cg_3.0_sub10_scaffold_410_c_2
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(323..877)
DNA (555bp) protein (185aa)
coiled-coil 54..75 Tax=CG_Moran_02
coiled-coil 54..75 id=2924 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
cg_3.0_sub10_scaffold_410_c_3
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(883..1458)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003747F1D rbh
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_410_c_4
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1480..1980)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F4W1_9BACT rbh
Uncharacterized protein Tax=CG_Moran_02
cg_3.0_sub10_scaffold_410_c_5
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2060..2851)
DNA (792bp) protein (264aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Moran_02
Putative bacterial peptidase A24 N-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_010L19 RepID=B3T1P0_9ZZZZ id=136642 bin=ACD8 species=uncultured marine microorganism HF4000_010L19 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD8 organism_group=OD1-i organism_desc=OD1-i rbh
peptidase A24A domain-containing protein
cg_3.0_sub10_scaffold_410_c_6
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2916..3545)
DNA (630bp) protein (210aa)
hypothetical protein Tax=CG_Moran_02
hypothetical protein id=53859 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
hypothetical protein
cg_3.0_sub10_scaffold_410_c_7
unknown

Not on your lists

comp(3542..3772)
DNA (231bp) protein (77aa)

This feature has no annotations

cg_3.0_sub10_scaffold_410_c_8
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3994..4383)
DNA (390bp) protein (130aa)
type IV pilin (prepilin) Tax=CG_Moran_02
transmembrane_regions 7..29 id=129591 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
type IV pilin (prepilin)
cg_3.0_sub10_scaffold_410_c_9
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4508..4876)
DNA (369bp) protein (123aa)
pilin, type IV; K02650 type IV pilus assembly protein PilA Tax=CG_Moran_02
transmembrane_regions 10..32 id=8388 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i rbh
pilin, type IV
cg_3.0_sub10_scaffold_410_c_10
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5058..6266)
DNA (1209bp) protein (403aa)
Pilin biogenesis protein n=1 Tax=uncultured bacterium RepID=K2FNT2_9BACT rbh
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC Tax=CG_Moran_02
Type II secretion system F domain
cg_3.0_sub10_scaffold_410_c_11
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6302..7396)
DNA (1095bp) protein (365aa)
twitching motility protein Tax=CG_Moran_02
adg:Adeg_1724 twitching motility protein; K02669 twitching motility protein PilT id=16753 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i rbh
twitching motility protein pilT
cg_3.0_sub10_scaffold_410_c_12
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7411..9087)
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2G6R2_9BACT rbh
putative type II secretion system protein E Tax=CG_Moran_02
putative type II secretion system protein E
cg_3.0_sub10_scaffold_410_c_13
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9099..9848)
DNA (750bp) protein (250aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_410_c_14
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9869..10387)
DNA (519bp) protein (173aa)
Tax=CG_Moran_02
cg_3.0_sub10_scaffold_410_c_15
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10434..11549)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EDE8_9BACT rbh
pilM2; type IV pilus assembly protein PilM Tax=CG_Moran_02
pilM2; type IV pilus assembly protein PilM
cg_3.0_sub10_scaffold_410_c_16
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

11758..14211
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F4X1_9BACT rbh
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=CG_Moran_02
ATPase AAA-2 domain-containing protein
cg_3.0_sub10_scaffold_410_c_17
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

14202..14945
DNA (744bp) protein (248aa)
phosphoribosyltransferase Tax=CG_Moran_02
phosphoribosyltransferase id=129663 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i rbh
phosphoribosyltransferase
cg_3.0_sub10_scaffold_410_c_18
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15001..15756)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E9Q2_9BACT rbh
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=CG_Moran_02
hypothetical protein
cg_3.0_sub10_scaffold_410_c_19
CG_Moran_02, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15932..16375)
DNA (444bp) protein (148aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) Tax=CG_Moran_02
isopentenyl-diphosphate delta-isomerase, type 2 (EC:5.3.3.2) id=96185 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
cg_3.0_sub10_scaffold_410_c_20
GWA1_OP11_34_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(16430..16699)
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=GWA1_OP11_34_13
Transposase
Displaying 20 items

View Taxonomy