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cg_0.2_sub10_scaffold_297_c

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_297_c_1
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..835)
DNA (834bp) protein (278aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=CG_Nomura_01
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=5803612 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA formyltransferase
cg_0.2_sub10_scaffold_297_c_2
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(816..1415)
DNA (600bp) protein (200aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=CG_Nomura_01
def; peptide deformylase (EC:3.5.1.88)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q076_9BACT
cg_0.2_sub10_scaffold_297_c_3
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1487..3433)
DNA (1947bp) protein (649aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=CG_Nomura_01
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=5227121 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
primosomal protein N'
cg_0.2_sub10_scaffold_297_c_4
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3552..4856
DNA (1305bp) protein (435aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=CG_Nomura_01
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] id=5803603 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
cg_0.2_sub10_scaffold_297_c_5
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4858..5871
DNA (1014bp) protein (338aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Nomura_01
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins id=5803602 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rod shape-determining protein MreB
cg_0.2_sub10_scaffold_297_c_6
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5902..6168)
DNA (267bp) protein (89aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_7
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6258..6974
DNA (717bp) protein (239aa)
DNA-directed DNA polymerase; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=CG_Nomura_01
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase III, delta' subunit id=1903434 bin=GWD2_Nitrospirae-related_57_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
cg_0.2_sub10_scaffold_297_c_8
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6977..7177
DNA (201bp) protein (67aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_9
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7167..8468
DNA (1302bp) protein (434aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_10
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8542..9093
DNA (552bp) protein (184aa)
ribosome recycling factor; K02838 ribosome recycling factor Tax=CG_Nomura_01
Frr; K02838 ribosome recycling factor id=5803375 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosome recycling factor
cg_0.2_sub10_scaffold_297_c_11
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9121..10215
DNA (1095bp) protein (365aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=CG_Nomura_01
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=5227116 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
cg_0.2_sub10_scaffold_297_c_12
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


10942..12201
DNA (1260bp) protein (420aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=CG_Nomura_01
hne:HNE_1764 proS; prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=129732 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
prolyl-tRNA synthetase
cg_0.2_sub10_scaffold_297_c_13
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12206..13255
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWV6_9BACT
mreB; cell shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Nomura_01
mreB; cell shape-determining protein MreB
cg_0.2_sub10_scaffold_297_c_14
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13230..14024
DNA (795bp) protein (265aa)
Rod shape-determining protein MreC Tax=CG_Nomura_01
Rod shape-determining protein MreC id=5803380 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_297_c_15
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14029..14283
DNA (255bp) protein (85aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_16
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14321..16066
DNA (1746bp) protein (582aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 Tax=CG_Nomura_01
peptidoglycan glycosyltransferase (EC:2.4.1.129)
penicillin-binding protein 2; K05515 penicillin-binding protein 2 id=5803382 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_297_c_17
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16165..16632
DNA (468bp) protein (156aa)
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=CG_Nomura_01
Transcription elongation factor GreA id=4995450 bin=GWA2_OP3_53_43 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
transcription elongation factor GreA
cg_0.2_sub10_scaffold_297_c_18
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16725..18197
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
lysyl-tRNA synthetase (class II) Tax=CG_Nomura_01
lysyl-tRNA synthetase (class II)
cg_0.2_sub10_scaffold_297_c_19
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18515..18949
DNA (435bp) protein (145aa)
cell division protein MraZ; K03925 MraZ protein Tax=CG_Nomura_01
cell division protein MraZ; K03925 MraZ protein id=5803432 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein MraZ
cg_0.2_sub10_scaffold_297_c_20
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18957..19841
DNA (885bp) protein (295aa)
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=CG_Nomura_01
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] id=5803433 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosomal RNA small subunit methyltransferase H (EC:2.1.1.199)
cg_0.2_sub10_scaffold_297_c_21
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19882..20208
DNA (327bp) protein (109aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_22
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20245..21945
DNA (1701bp) protein (567aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=CG_Nomura_01
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=5803435 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidoglycan glycosyltransferase (EC:2.4.1.129)
cg_0.2_sub10_scaffold_297_c_23
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21923..23242
DNA (1320bp) protein (440aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=CG_Nomura_01
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=5803436 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
cg_0.2_sub10_scaffold_297_c_trna_1
unknown

Not on your lists

comp(23548..23619)
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_297_c_24
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

23797..24345
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003764F9E
hypothetical protein Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_25
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

24473..24847
DNA (375bp) protein (125aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_26
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25004..25219
DNA (216bp) protein (72aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_297_c_27
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25281..26747
DNA (1467bp) protein (489aa)
hypothetical protein Tax=CG_Nomura_01
Putative uncharacterized protein id=1815381 bin=GWE2_Bacteroidetes_40_15 species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Displaying 28 items

View Taxonomy