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CG01_land_8_20_14_3.00_scaffold_508_c

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG01_land_8_20_14_3.00_scaffold_508_c_1

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comp(2..175)
DNA (174bp) protein (58aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000361B477
Uncharacterized protein {ECO:0000313|EMBL:KKO02904.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
CG01_land_8_20_14_3.00_scaffold_508_c_2
CG_CPR10_01, CG_CPR10, Bacteria

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comp(323..880)
DNA (558bp) protein (186aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375F470
ribosome recycling factor
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_3

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comp(877..1821)
DNA (945bp) protein (315aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003616D88
Marine sediment metagenome DNA, contig: S03H2_C00636 {ECO:0000313|EMBL:GAH23159.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG01_land_8_20_14_3.00_scaffold_508_c_4
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(1825..2823)
DNA (999bp) protein (333aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000370B3FC
MreB/Mrl family cell shape determining protein
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_5
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(2846..4033)
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FBBE1
Tax=CG_CPR10_03
CG01_land_8_20_14_3.00_scaffold_508_c_6

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comp(4098..6431)
DNA (2334bp) protein (778aa)
Uncharacterized protein Tax=Atopobium vaginae PB189-T1-4 RepID=E1L309_9ACTN
Marine sediment metagenome DNA, contig: S03H2_S10582 {ECO:0000313|EMBL:GAH69465.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase III subunit gamma/tau
CG01_land_8_20_14_3.00_scaffold_508_c_7
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

6621..7913
DNA (1293bp) protein (431aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003798341
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_8
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(7921..8637)
DNA (717bp) protein (239aa)
hypothetical protein, partial Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380BD1E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
CG01_land_8_20_14_3.00_scaffold_508_c_9
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(8695..9201)
DNA (507bp) protein (169aa)
30S ribosomal protein S9 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_10
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(9230..9577)
DNA (348bp) protein (116aa)
50S ribosomal protein L13 bin=GWA1_ZB2_49_26 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rplM; 50S ribosomal protein L13
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_11
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(9630..9980)
DNA (351bp) protein (117aa)
50S ribosomal protein L17 bin=GWA1_ZB2_49_26 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rplQ; 50S ribosomal protein L17
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_12
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(9946..10749)
DNA (804bp) protein (268aa)
DNA-directed RNA polymerase subunit alpha bin=GWA1_ZB2_49_26 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
DNA-directed RNA polymerase, alpha subunit
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_13
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


comp(10754..11386)
DNA (633bp) protein (211aa)
30S ribosomal protein S4 bin=GWC1_OD1_38_17 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rpsD; 30S ribosomal protein S4
Tax=CG_CPR10_03
CG01_land_8_20_14_3.00_scaffold_508_c_14
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(11444..11896)
DNA (453bp) protein (151aa)
30S ribosomal protein S11 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037D367B
30S ribosomal protein S11
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_15
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(11901..12290)
DNA (390bp) protein (130aa)
30S ribosomal protein S13 bin=GWA1_ZB2_49_26 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
30S ribosomal protein S13
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_16
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(12408..12632)
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 bin=GWA1_ZB2_49_26 species=unknown genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
translation initiation factor IF-1
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_17
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(12665..13933)
DNA (1269bp) protein (423aa)
id=3423165 bin=GWA1_ZB2_49_26 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=CG_CPR10_01
CG01_land_8_20_14_3.00_scaffold_508_c_18
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists


comp(14039..15751)
DNA (1713bp) protein (571aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003805103
Alanine-tRNA ligase
Tax=CG_CPR10_01
Displaying 18 items

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