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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_1
GWB1_OD1_45_9, Parcubacteria, Bacteria

Not on your lists

225..737
DNA (513bp) protein (171aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003763FCF
Uncharacterized protein {ECO:0000313|EMBL:KKU15040.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_45_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_2
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

839..2836
DNA (1998bp) protein (666aa)
Elongation factor 4 {ECO:0000313|EMBL:KKU91105.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
Elongation factor 4 bin=GWC1_OD1_38_17 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
GTP-binding protein LepA
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_3

Not on your lists

3056..3352
DNA (297bp) protein (99aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM17515.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
coiled-coil 35..63 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_trna_1
unknown

Not on your lists

3414..3484
DNA (71bp)
transferRNA Gly
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_4
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

3698..4270
DNA (573bp) protein (191aa)
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ECF subfamily RNA polymerase sigma-24 subunit
Tax=GWA1_OD1_44_24_partial
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_5

Not on your lists

4603..5025
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT56254.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
hypothetical protein bin=GWA2_CPR4_42_17 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_6
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5038..5544
DNA (507bp) protein (169aa)
id=4731801 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_7
GWB1_OD1_45_9_partial, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5595..7325
DNA (1731bp) protein (577aa)
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KKU16187.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_45_9b.;"
Efflux transporter, RND family, MFP subunit (Fragment) bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RND family efflux transporter MFP subunit
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_8
unknown

Not on your lists

7586..7702
DNA (117bp) protein (39aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_9
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

7721..8437
DNA (717bp) protein (239aa)
ABC-type transport system bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PhnL; ABC transporter
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_10
unknown

Not on your lists

8418..8558
DNA (141bp) protein (47aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_11
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

8555..9778
DNA (1224bp) protein (408aa)
hypothetical protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
multidrug ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_12
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

9993..10415
DNA (423bp) protein (141aa)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI0003785059
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_13
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(11247..12209)
DNA (963bp) protein (321aa)
obgE; GTPase ObgE; K03979 GTP-binding protein bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin11_novelCP organism_group=Unknown_CP
obgE; GTPase ObgE
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_14
GWA1_OD1_Jorgensenbacteria_54_12_curated, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12246..13409)
DNA (1164bp) protein (388aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037B903A
rarA; replication-associated recombination protein A
Tax=GWA1_OD1_Jorgensenbacteria_54_12_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_15
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(13853..14470)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AMM6_AZOBR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_16
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

15068..15379
DNA (312bp) protein (104aa)
GTP-binding protein TypA/BipA Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDQ2_CHLTF
GTP-binding protein TypA/BipA
Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_17
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

15399..15584
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_18
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(15616..16245)
DNA (630bp) protein (210aa)
Protein RecA bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
putative cytosolic protein
Tax=Altiarchaeum hamiconexum
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_19
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(16247..17530)
DNA (1284bp) protein (428aa)
modification methylase MjaI (EC:2.1.1.113)
Modification methylase MjaI bin=GWA1_ZB2_49_26 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_20
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17932..18411)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Indibacter alkaliphilus LW1 RepID=S2E7K9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_trna_3
unknown

Not on your lists

comp(17952..18022)
DNA (71bp)
transferRNA Gln
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_21

Not on your lists

comp(18677..19510)
DNA (834bp) protein (278aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:KKS87724.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11.;"
methionyl-tRNA formyltransferase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_22
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

20080..20574
DNA (495bp) protein (165aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Peptide deformylase {ECO:0000313|EMBL:KKU91439.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
formylmethionine deformylase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_23
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

20980..22290
DNA (1311bp) protein (437aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Carboxyl-terminal protease {ECO:0000313|EMBL:KKU94165.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
carboxyl-terminal protease
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_24

Not on your lists


22849..23289
DNA (441bp) protein (147aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000362D27E
50S ribosomal protein L9 {ECO:0000313|EMBL:KKS87729.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11.;"
50S ribosomal protein L9
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_25
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


comp(23523..23795)
DNA (273bp) protein (91aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037EEFAD
50S ribosomal protein L27
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_26
unknown

Not on your lists

23818..24048
DNA (231bp) protein (77aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_615_c_trna_2
unknown

Not on your lists

24101..24184
DNA (84bp)
transferRNA Leu
Displaying 29 items

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