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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_1
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


33..398
DNA (366bp) protein (122aa)
50S ribosomal protein L21 bin=GWC1_CPR2_39_9 species=unknown genus=Candidatus Arthromitus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
ribosomal protein L21P
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_2
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

439..963
DNA (525bp) protein (175aa)
nuclease precursor (EC:3.1.31.1)
Micrococcal nuclease-like nuclease bin=GWD2_CPR2_39_7 species=Clostridium pasteurianum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_3
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

1278..1475
DNA (198bp) protein (66aa)
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_4
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

comp(1729..1929)
DNA (201bp) protein (67aa)
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_5
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

2082..2849
DNA (768bp) protein (256aa)
Chromosome segregation ATPase bin=GWC1_CPR2_39_9 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
chromosome segregation ATPase
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_6
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

2834..3670
DNA (837bp) protein (279aa)
Chromosome (Plasmid) partitioning protein ParB / Stage 0 sporulation protein J bin=GWC1_CPR2_39_9 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
parB-like partition protein
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_7
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

comp(3667..4293)
DNA (627bp) protein (209aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I bin=GWC1_CPR2_39_9 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_8
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

4371..5741
DNA (1371bp) protein (457aa)
LytR family transcriptional protein bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
LytR family transcriptional protein
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_9
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

5725..6531
DNA (807bp) protein (269aa)
id=3001277 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_10
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

6553..7725
DNA (1173bp) protein (391aa)
protease Do bin=GWD2_CPR2_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
protease Do
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_11
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

comp(7729..8802)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 bin=GWC1_CPR2_39_9 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
prfA; peptide chain release factor 1
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_12
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


comp(8856..9143)
DNA (288bp) protein (96aa)
50S ribosomal protein L31 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpmE; 50S ribosomal protein L31
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_13
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


9326..10030
DNA (705bp) protein (235aa)
30S ribosomal protein S2 bin=GWC1_CPR2_39_9 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rpsB; 30S ribosomal protein S2
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_14
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

10051..10641
DNA (591bp) protein (197aa)
Elongation factor Ts bin=GWC1_CPR2_39_9 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
tsf; elongation factor Ts
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_15
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

10650..11204
DNA (555bp) protein (185aa)
Ribosome-recycling factor bin=GWC1_CPR2_39_9 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
ribosome recycling factor
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_16
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

11218..11895
DNA (678bp) protein (226aa)
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase bin=GWC1_CPR2_39_9 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_17
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

11892..12977
DNA (1086bp) protein (362aa)
Bifunctional short chain isoprenyl diphosphate synthase (EC:2.5.1.10 2.5.1.1)
Geranylgeranyl pyrophosphate synthase bin=GWC1_CPR2_39_9 species=uncultured archaeon GZfos37B2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_18
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

12977..14080
DNA (1104bp) protein (368aa)
Membrane-associated zinc metalloprotease bin=GWC1_CPR2_39_9 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
membrane-associated zinc metalloprotease
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_19
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists


14083..15318
DNA (1236bp) protein (412aa)
Proline--tRNA ligase bin=GWD1_TM7_39_7 species=Turicibacter sanguinis genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Prolyl-tRNA synthetase
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_20
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

15363..16412
DNA (1050bp) protein (350aa)
Rod shape-determining protein MreB bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rod shape-determining protein MreB
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_21
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

16416..17198
DNA (783bp) protein (261aa)
Cell shape-determining protein MreC bin=GWC1_CPR2_39_9 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
rod shape-determining protein MreC
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_22
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

17200..17694
DNA (495bp) protein (165aa)
Putative uncharacterized protein bin=GWC1_TM7_41_48 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_TM7_41_48 organism_group=TM7
rod shape-determining protein MreD
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_23
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

17687..19639
DNA (1953bp) protein (651aa)
Penicillin-binding protein 2 bin=GWC1_CPR2_39_9 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
penicillin-binding protein 2
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_24
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

19785..20246
DNA (462bp) protein (154aa)
Transcription elongation factor GreA bin=GWC1_CPR2_39_9 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
transcription elongation factor GreA
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_25
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

20289..21833
DNA (1545bp) protein (515aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase bin=GWC2_CPR2_39_35 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_26
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

21914..23218
DNA (1305bp) protein (435aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_27
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

23196..23546
DNA (351bp) protein (117aa)
Sigma 54 modulation protein/ribosomal protein S30EA bin=GWC1_CPR2_39_9 species=Campylobacter lari genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
sigma-54 modulation protein/ribosomal protein, S30EA family
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_28
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

23546..23947
DNA (402bp) protein (134aa)
id=2794699 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=CG_CPR17-01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_542_c_29
CG_CPR17-01, CG_CPR17, Bacteria

Not on your lists

23975..25285
DNA (1311bp) protein (437aa)
Protein translocase subunit SecA bin=GWC1_CPR2_39_9 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
preprotein translocase subunit SecA
Tax=CG_CPR17-01
Displaying 29 items

View Taxonomy