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2013_40cm_scaffold_7

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Displaying items 1-30 of 326 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_40cm_scaffold_7_1
unknown

Not on your lists

2..169
DNA (168bp) protein (56aa)

This feature has no annotations

2013_40cm_scaffold_7_2
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

330..1193
DNA (864bp) protein (288aa)
Uncharacterized protein {ECO:0000313|EMBL:ABG57733.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC
2013_40cm_scaffold_7_3
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1198..2118
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036F1B84
Catechol dioxygenase {ECO:0000313|EMBL:EAZ82037.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
hypothetical protein
2013_40cm_scaffold_7_4
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2209..3945
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036BA28A
Uncharacterized protein {ECO:0000313|EMBL:KIF26351.1}; Flags: Fragment;; TaxID=1574475 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montan
putative aminopeptidase
2013_40cm_scaffold_7_5
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(4038..5243)
DNA (1206bp) protein (402aa)
GTPase HflX id=3641733 bin=GWC2_Bacteroidetes_40_13 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
GTPase HflX
Tax=BJP_IG2102_Bacteroidetes_40_9
2013_40cm_scaffold_7_6
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5322..5942)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000366952B
cytochrome c, mono- and diheme variants family Tax=GWA2_Bacteroidetes_31_9_curated
cytochrome c, mono- and diheme variants family
2013_40cm_scaffold_7_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

6054..8588
DNA (2535bp) protein (845aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Uncharacterized protein id=4204350 bin=GWF2_Bacteroidetes_38_335 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein rbh
2013_40cm_scaffold_7_8
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8694..9845
DNA (1152bp) protein (384aa)
two-component sensor histidine kinase Tax=GWA2_Bacteroidetes_30_7_curated
Uncharacterized protein id=4221063 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
histidine kinase
2013_40cm_scaffold_7_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

9847..10974
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002FAA926
putative oxygen-independent coproporphyrinogen III oxidase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
coproporphyrinogen III oxidase
2013_40cm_scaffold_7_10
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10971..11648)
DNA (678bp) protein (226aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EBS8_RUNSL
ribosomal RNA small subunit methyltransferase I
2013_40cm_scaffold_7_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(11694..12989)
DNA (1296bp) protein (432aa)
Arginyl aminopeptidase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NPT5_9BACT
peptidase M28 Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
peptidase M28
2013_40cm_scaffold_7_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13008..13586)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXS6_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD05491.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadens
2013_40cm_scaffold_7_13
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13734..14312
DNA (579bp) protein (193aa)
Thymidine kinase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FCU1_9BACT
thymidine kinase
Tax=BJP_08E140C01_Bacteriodales_41_10
2013_40cm_scaffold_7_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

14349..16850
DNA (2502bp) protein (834aa)
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Alanine racemase id=3454617 bin=GWF2_Bacteroidetes_38_335 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
2013_40cm_scaffold_7_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17339..17995
DNA (657bp) protein (219aa)
Transcriptional regulator, XRE family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ31_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KJS05471.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
XRE family transcriptional regulator
2013_40cm_scaffold_7_16
unknown

Not on your lists

comp(18084..19058)
DNA (975bp) protein (325aa)

This feature has no annotations

2013_40cm_scaffold_7_17
unknown

Not on your lists

comp(19086..19676)
DNA (591bp) protein (197aa)

This feature has no annotations

2013_40cm_scaffold_7_18
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19808..20200)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255CBA2
hypothetical protein Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
2013_40cm_scaffold_7_19
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20197..20382)
DNA (186bp) protein (62aa)
YcfA superfamily protein id=3494392 bin=GWF2_Bacteroidetes_41_31 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
YcfA superfamily protein Tax=GWF2_Bacteroidetes_41_31_curated
YcfA superfamily protein
2013_40cm_scaffold_7_20
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


20747..21193
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQ74_9BACT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source
50S ribosomal protein L13
2013_40cm_scaffold_7_21
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21216..21647
DNA (432bp) protein (144aa)
30S ribosomal protein S9 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B4F4E
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=GWA2_Bacteroidetes_32_17_curated
30S ribosomal protein S9
2013_40cm_scaffold_7_22
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists


21699..22583
DNA (885bp) protein (295aa)
30S ribosomal protein S2 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C173_SPHS2
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Bacteroid_01
30S ribosomal protein S2
2013_40cm_scaffold_7_23
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

22716..23552
DNA (837bp) protein (279aa)
Elongation factor Ts n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C172_SPHS2
elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
elongation factor Ts
2013_40cm_scaffold_7_24
unknown

Not on your lists

23575..24117
DNA (543bp) protein (181aa)

This feature has no annotations

2013_40cm_scaffold_7_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

24147..24860
DNA (714bp) protein (238aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB52_9SPHI
2013_40cm_scaffold_7_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(25033..27042)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037FA73C
ABC transporter ATPase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
ABC transporter ATPase
2013_40cm_scaffold_7_27
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27118..27408)
DNA (291bp) protein (97aa)
Two-component system response regulator n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TV36_9FLAO
two-component system response regulator
Tax=BJP_08E140C01_Flavobacteriales_35_8
2013_40cm_scaffold_7_28
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27616..28362)
DNA (747bp) protein (249aa)
Conserved repeat domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L593_HALH1
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:AEE49773.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Halisco
2013_40cm_scaffold_7_29
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28497..31688)
DNA (3192bp) protein (1064aa)
beta-glycosidase-like protein (EC:3.2.1.-)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZPY0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY27635.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
2013_40cm_scaffold_7_30
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31782..33473)
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLN0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS05335.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
PDK repeat-containing protein
Displaying items 1-30 of 326 in total

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