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2013_60cm_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 208 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2013_60cm_scaffold_28_1
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..782
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH50_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM93172.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ol
2013_60cm_scaffold_28_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1178..1723
DNA (546bp) protein (182aa)
UPI0003CE9BA8 related cluster n=1 Tax=unknown RepID=UPI0003CE9BA8
Deaminase reductase {ECO:0000313|EMBL:ESW87668.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJ
bifunctional deaminase-reductase domain-containing protein
2013_60cm_scaffold_28_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2072..2311
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:EIT69840.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
Uncharacterized protein id=4542268 bin=GWC2_Elusimicrobia_51_8 species=Cronobacter sakazakii genus=Cronobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
hypothetical protein
2013_60cm_scaffold_28_4
unknown

Not on your lists

2326..2856
DNA (531bp) protein (177aa)

This feature has no annotations

2013_60cm_scaffold_28_5
Idiomarina sp. MCCC 1A10513, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3677..4240
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000367B259
Uncharacterized protein {ECO:0000313|EMBL:KFZ28383.1}; TaxID=1517416 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina sp. MCCC
2013_60cm_scaffold_28_6
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

5185..6099
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MMT3_CALBD
hypothetical protein Tax=RBG_16_Chloroflexi_50_9_curated
hypothetical protein
2013_60cm_scaffold_28_7
Streptomyces sp. F12, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6840..7568
DNA (729bp) protein (243aa)
UPI0003D82E45 related cluster n=1 Tax=unknown RepID=UPI0003D82E45
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AHE40201.1}; TaxID=1436084 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. F12.;"
aminoglycoside phosphotransferase
2013_60cm_scaffold_28_8
unknown

Not on your lists

7848..8267
DNA (420bp) protein (140aa)

This feature has no annotations

2013_60cm_scaffold_28_9
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8575..8784
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SA01_PELPB
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
hypothetical protein
2013_60cm_scaffold_28_10
unknown

Not on your lists

comp(8683..8889)
DNA (207bp) protein (69aa)

This feature has no annotations

2013_60cm_scaffold_28_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8928..9275
DNA (348bp) protein (116aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Putative uncharacterized protein id=2306526 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
2013_60cm_scaffold_28_12
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9402..10040)
DNA (639bp) protein (213aa)
short chain dehydrogenase (EC:1.1.1.100)
Short chain dehydrogenase {ECO:0000313|EMBL:CDM56030.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDM56030.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
UPI0003D602E3 related cluster n=1 Tax=unknown RepID=UPI0003D602E3
2013_60cm_scaffold_28_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10178..10504)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHR4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60642.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
putative conserved protein
2013_60cm_scaffold_28_14
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10634..10966
DNA (333bp) protein (111aa)
Transcriptional regulator, HxlR family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SBL0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGM32140.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
putative transcriptional regulator
2013_60cm_scaffold_28_15
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11241..11489
DNA (249bp) protein (83aa)
Growth regulator n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UL71_9CHRO
SpoVT/AbrB domain-containing protein; K07172 antitoxin Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
SpoVT/AbrB domain-containing protein
2013_60cm_scaffold_28_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11561..11824
DNA (264bp) protein (88aa)
transcriptional modulator of MazE/toxin MazF; K07171 mRNA interferase [EC:3.1.-.-] Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Transcriptional modulator of MazE/toxin, MazF id=4765407 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PemK family protein
2013_60cm_scaffold_28_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11837..12424
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VM3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86292.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
2013_60cm_scaffold_28_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13077..13448
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WY2_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
2013_60cm_scaffold_28_19
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

13964..14431
DNA (468bp) protein (156aa)
globin n=1 Tax=Acidovorax radicis RepID=UPI0002376972
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE84748.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsen
2013_60cm_scaffold_28_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14501..15193
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD43_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92694.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_28_21
unknown

Not on your lists

15215..15766
DNA (552bp) protein (184aa)

This feature has no annotations

2013_60cm_scaffold_28_22
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15871..16593
DNA (723bp) protein (241aa)
Putative uncharacterized protein id=3785943 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_58_17_curated
hypothetical protein
2013_60cm_scaffold_28_23
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17230..18405
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0003745C86
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
2013_60cm_scaffold_28_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18427..19362)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACR2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40289.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
2013_60cm_scaffold_28_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19472..20977
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH2_GEMAT
peptidase S51 dipeptidase E
Peptidase S51 dipeptidase E {ECO:0000313|EMBL:AHG93819.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_28_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20974..23253
DNA (2280bp) protein (760aa)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH7_RHOM4
ASPIC/UnbV domain protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG89895.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
2013_60cm_scaffold_28_27
unknown

Not on your lists

comp(23277..23876)
DNA (600bp) protein (200aa)

This feature has no annotations

2013_60cm_scaffold_28_28
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

24051..24551
DNA (501bp) protein (167aa)
DinB superfamily protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N077_9BACT
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
DinB-like domain protein
2013_60cm_scaffold_28_29
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24493..25560
DNA (1068bp) protein (356aa)
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J735_CYCMS
inosine/uridine-preferring nucleoside hydrolase
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:AEL26926.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacte
2013_60cm_scaffold_28_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

25687..25890
DNA (204bp) protein (68aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92805.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Uncharacterized protein id=2160488 bin=GWB2_Chloroflexi_49_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Displaying items 1-30 of 208 in total

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