ggKbase home page

JGI24025J20009_10000570

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
JGI24025J20009_10000570_1
unknown

Not on your lists

1..240
DNA (240bp) protein (80aa)

This feature has no annotations

JGI24025J20009_10000570_2
RLO_PLX_64_10, Bacteria

Not on your lists

336..1025
DNA (690bp) protein (230aa)
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
RNA polymerase subunit sigma-24
JGI24025J20009_10000570_3
Burkholderia sp. WSM2230, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1022..1525
DNA (504bp) protein (168aa)

This feature has no annotations

JGI24025J20009_10000570_4
Methanococcus vannielii, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

1816..2397
DNA (582bp) protein (194aa)
hypothetical protein
Chromatin associated protein KTI12 {ECO:0000313|EMBL:ABR54705.1}; TaxID=406327 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus
JGI24025J20009_10000570_5
bacterium UASB270, Bacteria

Not on your lists

comp(2455..4020)
DNA (1566bp) protein (522aa)
Citrate lyase alpha chain {ECO:0000313|EMBL:GAK59779.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
citF; Citrate lyase subunit alpha
JGI24025J20009_10000570_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4010..5230)
DNA (1221bp) protein (407aa)
citE; Citrate lyase subunit beta
Citrate lyase subunit beta {ECO:0000313|EMBL:AFH48858.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacte
JGI24025J20009_10000570_7
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(5235..5735)
DNA (501bp) protein (167aa)
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_13_Euryarchaeota_31_8_curated
leuD; 3-isopropylmalate dehydratase small subunit
JGI24025J20009_10000570_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(5732..7000)
DNA (1269bp) protein (423aa)
homoaconitate hydratase family protein/3-isopropylmalate dehydratase, large subunit Tax=RBG_19FT_COMBO_JS1_35_14_curated
homoaconitate hydratase
JGI24025J20009_10000570_9
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(7005..8819)
DNA (1815bp) protein (605aa)
homoaconitate hydratase family protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
JGI24025J20009_10000570_10
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(8820..9404)
DNA (585bp) protein (195aa)
metal dependent phosphohydrolase Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
putative domain HDIG-containing protein
JGI24025J20009_10000570_11

Not on your lists

comp(9678..11183)
DNA (1506bp) protein (502aa)
Marine sediment metagenome DNA, contig: S12H4_S11913 {ECO:0000313|EMBL:GAJ16187.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
JGI24025J20009_10000570_12

Not on your lists

comp(11327..12736)
DNA (1410bp) protein (470aa)
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ07818.1}; TaxID=455537 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_ANIW141I9.;"
FG-GAP repeat protein
JGI24025J20009_10000570_13
unknown

Not on your lists

comp(12947..13045)
DNA (99bp) protein (33aa)

This feature has no annotations

JGI24025J20009_10000570_14
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(13175..14386)
DNA (1212bp) protein (404aa)
peptidase M16 domain protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ADD08591.1}; Peptidase M16 inactive domain family {ECO:0000313|EMBL:EDY36908.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source
JGI24025J20009_10000570_15
unknown

Not on your lists

14504..14723
DNA (220bp) protein (73aa)

This feature has no annotations

JGI24025J20009_10000570_16

Not on your lists

comp(14839..15654)
DNA (816bp) protein (272aa)
Marine sediment metagenome DNA, contig: S01H4_C02388 {ECO:0000313|EMBL:GAG60848.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
SAM-dependent methlyltransferase
JGI24025J20009_10000570_17
Segetibacter koreensis, Segetibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15717..16610)
DNA (894bp) protein (298aa)
JGI24025J20009_10000570_18
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(16652..17206)
DNA (555bp) protein (185aa)
hypothetical protein; K07043 Tax=RBG_13_OP8X_37_8_curated
hypothetical protein
JGI24025J20009_10000570_19
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(17196..20276)
DNA (3081bp) protein (1027aa)
hsdR1; type I restriction-modification enzyme, subunit R (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=CG_Omnitr_02
hsdR1; type I restriction-modification enzyme, subunit R (EC:3.1.21.3)
JGI24025J20009_10000570_20
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20344..21612)
DNA (1269bp) protein (423aa)
Type I restriction-modification system specificity subunit S rbh
Type I restriction-modification system specificity subunit S {ECO:0000313|EMBL:EEB74390.1}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
JGI24025J20009_10000570_21
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(21612..22055)
DNA (444bp) protein (148aa)
hypothetical protein Tax=GWF2_WOR_2_43_52_curated
DNA-binding protein
JGI24025J20009_10000570_22
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(22308..22844)
DNA (537bp) protein (179aa)
hypothetical protein Tax=RBG_16_RIF03_38_10_curated
hypothetical protein
JGI24025J20009_10000570_23
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(23081..24118)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=CG_Elusi_02
hypothetical protein
JGI24025J20009_10000570_24
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(24111..25880)
DNA (1770bp) protein (590aa)
type I restriction modification enzyme, subunit M; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RBG_13_OP8X_37_8_curated
type I restriction modification enzyme, subunit M
JGI24025J20009_10000570_25
unknown

Not on your lists

comp(26224..26643)
DNA (420bp) protein (140aa)

This feature has no annotations

JGI24025J20009_10000570_26
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

26666..28384
DNA (1719bp) protein (573aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4
adenine deaminase rbh
Displaying 26 items

View Taxonomy