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sw_10_scaffold_877

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_877_1
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2..256
DNA (255bp) protein (85aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=1 Tax=Microcystis aeruginosa TAIHU98 RepID=L7E0W9_MICAE
atpA; F0F1 ATP synthase subunit alpha
sw_10_scaffold_877_2
unknown

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302..403
DNA (102bp) protein (34aa)

This feature has no annotations

sw_10_scaffold_877_3
Parachlorella kessleri, Parachlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

458..598
DNA (141bp) protein (47aa)
Photosystem II reaction center protein K n=1 Tax=Parachlorella kessleri RepID=C7BET9_PARKE
Photosystem II reaction center protein K {ECO:0000256|HAMAP-Rule:MF_00441}; Short=PSII-K {ECO:0000256|HAMAP-Rule:MF_00441};; TaxID=3074 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae
Photosystem II 4 kDa reaction centre component
sw_10_scaffold_877_trna_1
unknown

Not on your lists

838..910
DNA (73bp)
transferRNA
sw_10_scaffold_877_4
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists


1159..1428
DNA (270bp) protein (90aa)
50S ribosomal protein L23, chloroplastic n=1 Tax=Pyramimonas parkeae RepID=C0JX26_9CHLO
50S ribosomal protein L23, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimon
50S ribosomal protein L23
Euk and Cyno Kari Finstad (2/5/15)
sw_10_scaffold_877_5
Bathycoccus prasinos, Bathycoccus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists


1469..2215
DNA (747bp) protein (249aa)
50S ribosomal protein L2 n=1 Tax=Bathycoccus prasinos RepID=K8FE48_9CHLO
50S ribosomal protein L2, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=41875 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bath
rplB; 50S ribosomal protein L2
Euk and Cyano Kari Finstad (2/5/15)
sw_10_scaffold_877_6
Oltmannsiellopsis viridis, Oltmannsiellopsis, Chlorophyta, Viridiplantae

Not on your lists


2245..2511
DNA (267bp) protein (89aa)
30S ribosomal protein S19, chloroplastic n=1 Tax=Oltmannsiellopsis viridis RepID=RR19_OLTVI
30S ribosomal protein S19, chloroplastic {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=51324 species="Eukaryota; Viridiplantae; Chlorophyta; Oltmannsiellopsis.;" source="Oltmannsiellopsis viridis (Marine f
rpsS; 30S ribosomal protein S19
sw_10_scaffold_877_7
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


2596..3258
DNA (663bp) protein (221aa)
30S ribosomal protein S3 n=2 Tax=Arthrospira platensis RepID=D4ZPG7_ARTPN
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=696747 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain
sw_10_scaffold_877_8
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists


3323..3757
DNA (435bp) protein (145aa)
50S ribosomal protein L16, chloroplastic n=1 Tax=Pyramimonas parkeae RepID=C0JX21_9CHLO
50S ribosomal protein L16, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004415}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; P
rplP; 50S ribosomal protein L16
Euk and Cyano Kari Finstad (2/5/15)
sw_10_scaffold_877_9
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


3732..4100
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Moorea producens 3L RepID=F4Y3A1_9CYAN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moo
50S ribosomal protein L14
Euk and Cyano Kari Finstad (2/5/15)
sw_10_scaffold_877_10
Cyanophora paradoxa, Cyanophora, Glaucocystophyceae, Eukaryota

Not on your lists


4100..4684
DNA (585bp) protein (195aa)
50S ribosomal protein L5 n=1 Tax=Microcystis aeruginosa PCC 9806 RepID=I4GQ88_MICAE
Ribosomal protein L5 {ECO:0000313|EMBL:AIU44615.1}; TaxID=2762 species="Eukaryota; Glaucocystophyceae; Cyanophoraceae; Cyanophora.;" source="Cyanophora paradoxa.;"
rplE; 50S ribosomal protein L5
Euk and Cyano Kari Finstad (2/5/15)
sw_10_scaffold_877_11
Lobosphaera incisa, Lobosphaera, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

4791..6023
DNA (1233bp) protein (411aa)
Elongation factor Tu, chloroplastic n=1 Tax=Trebouxiophyceae sp. MX-AZ01 RepID=J7K8N8_9CHLO
Elongation factor Tu, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=312850 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Ch
tufB; elongation factor Tu
sw_10_scaffold_877_16S_1
unknown

Not on your lists

6139..7591
DNA (1453bp)
sw_10_scaffold_877_trna_2
unknown

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7647..7720
DNA (74bp)
transferRNA
sw_10_scaffold_877_trna_3
unknown

Not on your lists

7735..7807
DNA (73bp)
transferRNA
sw_10_scaffold_877_12
unknown

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comp(9604..10092)
DNA (489bp) protein (163aa)

This feature has no annotations

sw_10_scaffold_877_13
Oltmannsiellopsis viridis, Oltmannsiellopsis, Chlorophyta, Viridiplantae

Not on your lists

10735..11274
DNA (540bp) protein (180aa)
Putative site-specific DNA endonuclease n=1 Tax=Oltmannsiellopsis viridis RepID=Q20ET8_OLTVI
Putative site-specific DNA endonuclease {ECO:0000313|EMBL:ABB81975.1}; TaxID=51324 species="Eukaryota; Viridiplantae; Chlorophyta; Oltmannsiellopsis.;" source="Oltmannsiellopsis viridis (Marine flagel
site-specific DNA endonuclease
sw_10_scaffold_877_trna_4
unknown

Not on your lists

11868..11952
DNA (85bp)
transferRNA
sw_10_scaffold_877_14
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists


12108..12863
DNA (756bp) protein (252aa)
30S ribosomal protein S2, chloroplastic n=1 Tax=Pyramimonas parkeae RepID=C0JX53_9CHLO
30S ribosomal protein S2, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimona
rpsB; 30S ribosomal protein S2
sw_10_scaffold_877_15
Nephroselmis astigmatica, Nephroselmis, Nephroselmidophyceae, Chlorophyta, Viridiplantae

Not on your lists

13005..13118
DNA (114bp) protein (38aa)
50S ribosomal protein L36, chloroplastic n=3 Tax=Pyropia RepID=RK36_PYRYE
50S ribosomal protein L36, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00251}; TaxID=259378 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Nephroselmidophyceae; Nephroselmis.;" source="Ne
rpmJ; 50S ribosomal protein L36
sw_10_scaffold_877_16
unknown

Not on your lists

13120..14544
DNA (1425bp) protein (475aa)

This feature has no annotations

sw_10_scaffold_877_17
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists


14903..15277
DNA (375bp) protein (125aa)
30S ribosomal protein S12, chloroplastic n=1 Tax=Pyramimonas parkeae RepID=C0JX38_9CHLO
30S ribosomal protein S12, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00403}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimon
30S ribosomal protein S12
sw_10_scaffold_877_18
Eutreptiella gymnastica, Eutreptiella, Eutreptiales, Euglenida, Eukaryota

Not on your lists


15277..15762
DNA (486bp) protein (162aa)
30S ribosomal protein S7 n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034BC08A
30S ribosomal protein S7
Ribosomal protein S7 {ECO:0000256|RuleBase:RU003620}; TaxID=73025 species="Eukaryota; Euglenozoa; Euglenida; Eutreptiales; Eutreptiella.;" source="Eutreptiella gymnastica.;"
Euk and Cyano Kari Finstad (2/5/15)
sw_10_scaffold_877_trna_5
unknown

Not on your lists

16133..16206
DNA (74bp)
transferRNA
sw_10_scaffold_877_trna_6
unknown

Not on your lists

16241..16313
DNA (73bp)
transferRNA
sw_10_scaffold_877_19
Calliarthron tuberculosum, Calliarthron, Corallinales, Corallinophycidae, Eukaryota

Not on your lists

16330..17181
DNA (852bp) protein (284aa)
Cytochrome c biogenesis protein CcsA n=1 Tax=Calliarthron tuberculosum RepID=M4IU90_CALTB
Cytochrome c biogenesis protein CcsA {ECO:0000256|HAMAP-Rule:MF_01391}; TaxID=48942 species="Eukaryota; Rhodophyta; Florideophyceae; Corallinophycidae; Corallinales; Corallinaceae; Corallinoideae; Cal
ccsA; c-type cytochrome synthesis protein CcsA
sw_10_scaffold_877_20
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists

17218..17808
DNA (591bp) protein (197aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
protease subunit of ATP-dependent protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pyramimonas parkeae RepID=C0JWZ4_9CHLO
sw_10_scaffold_877_21
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists

17962..19488
DNA (1527bp) protein (509aa)
Photosystem II CP47 chlorophyll apoprotein n=1 Tax=Pyramimonas parkeae RepID=C0JWZ3_9CHLO
Photosystem II CP47 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01495, ECO:0000256|RuleBase:RU004535}; PSII 47 kDa protein {ECO:0000256|HAMAP-Rule:MF_01495}; Protein CP-47 {ECO:0000256|HAMAP-Ru
photosystem II chlorophyll-binding protein CP47
sw_10_scaffold_877_22
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

19504..19599
DNA (96bp) protein (32aa)
Photosystem II reaction center protein T {ECO:0000256|HAMAP-Rule:MF_00808}; Short=PSII-T {ECO:0000256|HAMAP-Rule:MF_00808};; TaxID=3068 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; C
psbT; photosystem II protein T; K02718 photosystem II PsbT protein
sw_10_scaffold_877_23
Stigeoclonium helveticum, Stigeoclonium, Chaetophorales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

19614..19748
DNA (135bp) protein (45aa)
Protein PsbN n=1 Tax=Stigeoclonium helveticum RepID=PSBN_STIHE
Protein PsbN {ECO:0000255|HAMAP-Rule:MF_00293}; TaxID=55999 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chaetophorales; Chaetophorales incertae sedis; Stigeoclonium.;" source="Stige
psbN; photosystem II protein N; K02715 PsbN protein
Displaying items 1-30 of 51 in total

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