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RBG_16_Archaea_41_19_RBG_16_scaffold_280

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_16_Archaea_41_19_RBG_16_scaffold_280_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1..372
DNA (372bp) protein (124aa)
hydrogenase, membrane subunit 4-like protein (HycC-like); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5] Tax=RBG_16_Euryarchaeota_41_19_curated
Similar to membrane-bound [NiFe]-hydrogenase-3, subunit C n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK0_9BACT
hydrogenase, membrane subunit 4-like protein (HycC-like)
RBG_16_Archaea_41_19_RBG_16_scaffold_280_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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442..600
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_280_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(597..1337)
DNA (741bp) protein (247aa)
ATP-binding protein PhnP n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIS7_METAC
phnP; ATP-binding protein PhnP; K06167 PhnP protein Tax=RBG_16_Euryarchaeota_41_19_curated
phnP; ATP-binding protein PhnP
RBG_16_Archaea_41_19_RBG_16_scaffold_280_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1413..2684)
DNA (1272bp) protein (424aa)
ATPases of the AAA+ class n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9Q2_METCZ
ATPase Tax=RBG_16_Euryarchaeota_41_19_curated
ATPase
RBG_16_Archaea_41_19_RBG_16_scaffold_280_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(2865..5513)
DNA (2649bp) protein (883aa)
UPF0182 protein Metlim_1483 n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z346_9EURY
hypothetical protein; K09118 hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5603..6412)
DNA (810bp) protein (270aa)
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_16_Euryarchaeota_41_19_curated
Diaminopimelate epimerase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWV8_METPS
dapF; diaminopimelate epimerase
RBG_16_Archaea_41_19_RBG_16_scaffold_280_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6417..7046)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I510_METCZ
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7191..7892
DNA (702bp) protein (234aa)
ubiquinone/menaquinone biosynthesis methyltransferase ubiE; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00035FE112
ubiquinone/menaquinone biosynthesis methyltransferase ubiE
RBG_16_Archaea_41_19_RBG_16_scaffold_280_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7936..9201
DNA (1266bp) protein (422aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RBG_16_Euryarchaeota_41_19_curated
Glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
UPI0003D1BB3D related cluster n=1 Tax=unknown RepID=UPI0003D1BB3D
RBG_16_Archaea_41_19_RBG_16_scaffold_280_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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9204..10133
DNA (930bp) protein (310aa)
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RBG_16_Euryarchaeota_41_19_curated
porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E721_METMS
RBG_16_Archaea_41_19_RBG_16_scaffold_280_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10136..10873
DNA (738bp) protein (246aa)
uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107); K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] Tax=RBG_16_Euryarchaeota_41_19_curated
Uroporphyrinogen-III methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BL0_METBF
RBG_16_Archaea_41_19_RBG_16_scaffold_280_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10877..11653
DNA (777bp) protein (259aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RBG_16_Euryarchaeota_41_19_curated
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6K9_METEZ
uroporphyrinogen III synthase HEM4
RBG_16_Archaea_41_19_RBG_16_scaffold_280_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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11759..13558
DNA (1800bp) protein (600aa)
UPF0313 protein MCON_1402 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BSW2_METCG
Radical SAM N-terminal domain-containing protein Tax=RBG_16_Euryarchaeota_41_19_curated
Radical SAM N-terminal domain-containing protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13593..14489)
DNA (897bp) protein (299aa)
pyridoxal phosphate synthase YaaD subunit; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RBG_16_Euryarchaeota_41_19_curated
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB26_METMS
pyridoxal phosphate synthase yaaD subunit
RBG_16_Archaea_41_19_RBG_16_scaffold_280_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14780..16087)
DNA (1308bp) protein (436aa)
Ribulose-1,5-bisphosphate carboxylase, Type III (EC:4.1.1.39)
Ribulose-1,5-bisphosphate carboxylase, Type III n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q321_METMZ
Ribulose-1,5-bisphosphate carboxylase, Type III Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_280_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(16106..16852)
DNA (747bp) protein (249aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=uncultured archaeon GZfos35D7 RepID=Q648Z8_9ARCH
phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=RBG_16_Euryarchaeota_41_19_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase
RBG_16_Archaea_41_19_RBG_16_scaffold_280_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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17066..18106
DNA (1041bp) protein (347aa)
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein; K00441 coenzyme F420 hydrogenase beta subunit [EC:1.12.98.1] Tax=RBG_16_Euryarchaeota_41_19_curated
Coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REU1_ARCPA
coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(18128..18925)
DNA (798bp) protein (266aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
Putative uncharacterized protein id=3047724 bin=GWF2_Planctomycetes_42_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(18909..19199)
DNA (291bp) protein (97aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM06_METH6
Amino acid/polyamine/organocation transporter, APC superfamily Tax=RBG_16_Euryarchaeota_41_19_curated
Amino acid/polyamine/organocation transporter, APC superfamily
RBG_16_Archaea_41_19_RBG_16_scaffold_280_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(19238..19435)
DNA (198bp) protein (66aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_280_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19551..20498
DNA (948bp) protein (316aa)
htpX; heat shock protein; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_41_19_curated
Protease HtpX homolog id=4716627 bin=GWA2_OP3_53_43 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
htpX; heat shock protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(20919..22115)
DNA (1197bp) protein (399aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S007_FERPA
major facilitator superfamily MFS_1 Tax=RBG_16_Euryarchaeota_41_19_curated
major facilitator superfamily MFS_1
RBG_16_Archaea_41_19_RBG_16_scaffold_280_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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22574..23863
DNA (1290bp) protein (430aa)
Sodium:neurotransmitter symporter Tax=RBG_16_Euryarchaeota_41_19_curated
sodium:neurotransmitter symporter id=14626813 bin=bin7_NC10_sister species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
Sodium:neurotransmitter symporter
RBG_16_Archaea_41_19_RBG_16_scaffold_280_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

23962..24204
DNA (243bp) protein (81aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_280_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

24197..25126
DNA (930bp) protein (310aa)
bacillolysin; K01400 bacillolysin [EC:3.4.24.28] Tax=RBG_16_Euryarchaeota_41_19_curated
Bacillolysin n=1 Tax=Bacillus cereus AH676 RepID=C2YA21_BACCE
bacillolysin
RBG_16_Archaea_41_19_RBG_16_scaffold_280_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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25383..26489
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUQ1_METHD
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

26491..27633
DNA (1143bp) protein (381aa)
ABC transporter, permease protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWH7_METMA
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_41_19_curated
ABC transporter, permease protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

27626..28390
DNA (765bp) protein (255aa)
ABC transporter, ATP-binding protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWH8_METMA
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RBG_16_Euryarchaeota_41_19_curated
ABC transporter, ATP-binding protein
RBG_16_Archaea_41_19_RBG_16_scaffold_280_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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28371..28685
DNA (315bp) protein (105aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
RBG_16_Archaea_41_19_RBG_16_scaffold_280_30
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

28705..29976
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469Q1_METBF
hypothetical protein; K06889 Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
Displaying items 1-30 of 62 in total

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