ggKbase home page

qh_10_scaffold_4116

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_4116_1
unknown

Not on your lists

3..803
DNA (801bp) protein (267aa)

This feature has no annotations

qh_10_scaffold_4116_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

955..1719
DNA (765bp) protein (255aa)
Acetyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV1_9EURY
Acetyl transferase {ECO:0000313|EMBL:ELZ25601.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
acetyltransferase
qh_10_scaffold_4116_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1716..1892)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25603.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_4116_4

Not on your lists

2014..3126
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4XMC5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09569.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
qh_10_scaffold_4116_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3123..3731)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25604.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_4116_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3728..6001)
DNA (2274bp) protein (758aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT1_9EURY
hypothetical protein
qh_10_scaffold_4116_7
unknown

Not on your lists

comp(6125..6691)
DNA (567bp) protein (189aa)

This feature has no annotations

qh_10_scaffold_4116_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7128..7490
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV5_9EURY
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
30S ribosomal protein L7Ae
qh_10_scaffold_4116_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7498..7728
DNA (231bp) protein (77aa)
30S ribosomal protein S28e n=2 Tax=Halobacteriaceae RepID=M0CT81_9EURY
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
30S ribosomal protein S28e
qh_10_scaffold_4116_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7728..8285
DNA (558bp) protein (186aa)
30S ribosomal protein L24e n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP40_9EURY
30S ribosomal protein L24e
30S ribosomal protein L24e {ECO:0000313|EMBL:CCQ32792.1}; 50S ribosomal protein L24e {ECO:0000313|EMBL:ERJ07172.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
qh_10_scaffold_4116_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8282..8761
DNA (480bp) protein (160aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP39_9EURY
qh_10_scaffold_4116_12
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8840..9757
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV36_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12448.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_10_scaffold_4116_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9813..10817
DNA (1005bp) protein (335aa)
Phosphotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQW0_9EURY
Phosphotransferase {ECO:0000313|EMBL:ELZ25611.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
phosphotransferase
qh_10_scaffold_4116_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10951..11463)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25615.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_4116_15
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11627..12736)
DNA (1110bp) protein (370aa)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; TaxID=751944 species="Archaea; E
metE; methionine synthase (EC:2.1.1.14)
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Halobacterium sp. DL1 RepID=G4IBG8_9EURY
qh_10_scaffold_4116_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12733..13746)
DNA (1014bp) protein (338aa)
Cobalamin-independent synthase MetE domain-containing protein (Fragment) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQC7_9EURY
Cobalamin-independent synthase MetE domain-containing protein {ECO:0000313|EMBL:ELZ25446.1}; Flags: Fragment;; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Cobalamin-independent synthase MetE domain-containing protein
qh_10_scaffold_4116_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14439..15338)
DNA (900bp) protein (300aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CU99_9EURY
qh_10_scaffold_4116_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15331..15909)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQB2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25450.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_4116_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15949..16305)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELZ25451.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ25451.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD3_9EURY
RNA polymerase Rpb4
qh_10_scaffold_4116_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16302..16592)
DNA (291bp) protein (97aa)
50S ribosomal protein L21e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL2_HALMD
50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
qh_10_scaffold_4116_21
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16856..17122)
DNA (267bp) protein (89aa)
effector protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F7089
translation elongation factor aEF-1 beta
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=123842
qh_10_scaffold_4116_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17125..17304)
DNA (180bp) protein (60aa)
Zn-ribbon RNA-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUA6_9EURY
Zn-ribbon RNA-binding protein {ECO:0000313|EMBL:ELZ25454.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
hypothetical protein
qh_10_scaffold_4116_23
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17689..17907
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XQC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62818.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qh_10_scaffold_4116_24
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17924..18556
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0BY72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ15368.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_10_scaffold_4116_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18695..19330)
DNA (636bp) protein (212aa)
FAD/NAD binding oxidoreductase (EC:1.18.1.3)
Oxidoreductase FAD-binding domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQB9_9EURY
Oxidoreductase FAD-binding domain protein {ECO:0000313|EMBL:ELZ25455.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimpl
Displaying 25 items

View Taxonomy