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qh_10_scaffold_1060

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1060_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..636
DNA (636bp) protein (212aa)
Dehydrogenase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIR9_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERH09989.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
short-chain dehydrogenase/reductase SDR
qh_10_scaffold_1060_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(684..1580)
DNA (897bp) protein (299aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX5 RepID=U1P8W8_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERG89987.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
ArsR family transcriptional regulator
qh_10_scaffold_1060_3
unknown

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1847..2002
DNA (156bp) protein (52aa)

This feature has no annotations

qh_10_scaffold_1060_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2051..3214
DNA (1164bp) protein (388aa)
aroB; 3-dehydroquinate synthase (EC:1.4.1.-); K11646 dehydroquinate synthase II [EC:1.4.1.-] id=24655091 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
aroB; 3-dehydroquinate synthase (EC:1.4.1.-)
qh_10_scaffold_1060_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3216..3650)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49466.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_10_scaffold_1060_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3678..4373)
DNA (696bp) protein (232aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMP5_HALUD
qh_10_scaffold_1060_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4620..5615
DNA (996bp) protein (332aa)
GTP-binding protein HSR1-related
GTP-binding protein HSR1-related id=24648983 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative GTPase {ECO:0000313|EMBL:ERH10117.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_1060_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5737..5982)
DNA (246bp) protein (82aa)
Uncharacterized protein id=24655088 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89982.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qh_10_scaffold_1060_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6086..6352
DNA (267bp) protein (89aa)
Ribosomal protein L37AE/L43A n=1 Tax=halophilic archaeon J07HX5 RepID=U1PD11_9EURY
Ribosomal protein L37AE/L43A {ECO:0000313|EMBL:ERG89981.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
ribosomal L37ae protein
qh_10_scaffold_1060_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6349..6483
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
DNA-directed RNA polymerase subunit P n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVP9_HALMD
RNA polymerase Rbp10
qh_10_scaffold_1060_11
unknown

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comp(6595..7179)
DNA (585bp) protein (195aa)

This feature has no annotations

qh_10_scaffold_1060_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7401..7886
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PD06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89976.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
bifunctional nuclease
qh_10_scaffold_1060_13
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7970..8767)
DNA (798bp) protein (266aa)
hypothetical protein id=24655081 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89975.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_1060_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8877..9164
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MK89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89974.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_1060_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9220..10143
DNA (924bp) protein (308aa)
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein id=24655079 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:ERG89973.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
iron ABC transporter substrate-binding protein
qh_10_scaffold_1060_16
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10201..11118
DNA (918bp) protein (306aa)
pyridoxal-5'-phosphate-dependent protein subunit beta; K01754 threonine dehydratase [EC:4.3.1.19] id=24655078 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Threonine dehydratase {ECO:0000313|EMBL:ERG89972.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
qh_10_scaffold_1060_17
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11130..11573)
DNA (444bp) protein (148aa)
transposase IS605 n=1 Tax=Halorubrum sp. T3 RepID=UPI0003772549
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADD05877.1}; Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELY30615.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialb
Displaying 17 items

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