ggKbase home page

qs_1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 157 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..435)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F0J8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61627.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_1_scaffold_2_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

719..1090
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9Z345_NATP1
Uncharacterized protein {ECO:0000313|EMBL:ELY80789.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
hypothetical protein
qs_1_scaffold_2_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1187..2908
DNA (1722bp) protein (574aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=543526 species="Archaea; Euryarchaeota;
Dihydroxy-acid dehydratase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RTP6_HALTV
qs_1_scaffold_2_4
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2967..3758
DNA (792bp) protein (264aa)
Short-chain dehydrogenase n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NLX1_9EURY
Short-chain dehydrogenase {ECO:0000313|EMBL:ERG98033.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50
short-chain dehydrogenase/reductase SDR
qs_1_scaffold_2_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3838..4212
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WVZ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY53361.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
qs_1_scaffold_2_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4258..4911
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWJ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26822.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
conserved hypothetical protein (DUF2387)
qs_1_scaffold_2_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4913..5566
DNA (654bp) protein (218aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPG8_HALUD
qs_1_scaffold_2_8
unknown

Not on your lists

comp(5651..6091)
DNA (441bp) protein (147aa)

This feature has no annotations

qs_1_scaffold_2_9
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6187..6810)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JHD9_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB29977.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_1_scaffold_2_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6989..7093
DNA (105bp) protein (35aa)
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ65683.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY27013.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
qs_1_scaffold_2_11
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7145..7570
DNA (426bp) protein (142aa)
BioY protein n=3 Tax=Halorubrum RepID=M0DJL3_9EURY
BioY protein {ECO:0000313|EMBL:ELZ34364.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
BioY protein
qs_1_scaffold_2_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7599..8036
DNA (438bp) protein (146aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4B8_HALJB
cobalt ABC transporter ATP-binding protein
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:ADJ13480.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Hala
qs_1_scaffold_2_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8127..10268
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4C3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13485.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_1_scaffold_2_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10265..10534)
DNA (270bp) protein (90aa)
PilT protein domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD22_9EURY
PilT protein domain-containing protein {ECO:0000313|EMBL:ELZ20262.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
PilT protein domain-containing protein
qs_1_scaffold_2_15
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11026..11430
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MRX3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ERG63420.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
hypothetical protein
qs_1_scaffold_2_16
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11480..12637)
DNA (1158bp) protein (386aa)
Tubulin/FtsZ GTPase n=2 Tax=Halorubrum RepID=V6DQF8_9EURY
Tubulin/FtsZ GTPase {ECO:0000313|EMBL:CDK38459.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
Tubulin/FtsZ GTPase
qs_1_scaffold_2_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13249..14091
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWV7_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:EMA44880.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
regulatory protein Crp
qs_1_scaffold_2_18
unknown

Not on your lists

14147..14635
DNA (489bp) protein (163aa)

This feature has no annotations

qs_1_scaffold_2_19
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14645..15835)
DNA (1191bp) protein (397aa)
Aspartate aminotransferase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RCB6_9EURY
aminotransferase
Aminotransferase {ECO:0000313|EMBL:AIF69375.1}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
qs_1_scaffold_2_20
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16265..16474)
DNA (210bp) protein (70aa)
UPF0391 membrane protein Hlac_2074 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQZ8_HALLT
hypothetical protein
UPF0391 membrane protein Hlac_2074 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusp
qs_1_scaffold_2_21
unknown

Not on your lists

comp(16503..16871)
DNA (369bp) protein (123aa)

This feature has no annotations

qs_1_scaffold_2_22
unknown

Not on your lists

17362..17496
DNA (135bp) protein (45aa)

This feature has no annotations

qs_1_scaffold_2_trna_1
unknown

Not on your lists

comp(17705..17778)
DNA (74bp)
transferRNA
qs_1_scaffold_2_23

Not on your lists

comp(18170..18706)
DNA (537bp) protein (179aa)
FxsA cytoplasmic membrane protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGR4_9ARCH
FxsA cytoplasmic membrane protein
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:AEN06455.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_1_scaffold_2_24
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18962..19771
DNA (810bp) protein (270aa)
TrmB family transcriptional regulator n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WDU9_9EURY
TrmB family transcriptional regulator {ECO:0000313|EMBL:ELY47680.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum su
TrmB family transcriptional regulator
qs_1_scaffold_2_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19790..20719)
DNA (930bp) protein (310aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=795797 species="Archaea; Eurya
GTP cyclohydrolase MptA n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J829_HALJB
GTP cyclohydrolase
qs_1_scaffold_2_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20776..21591)
DNA (816bp) protein (272aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=797114 species="Archaea; Euryarchaeota;
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTH7_9EURY
sugar kinase
qs_1_scaffold_2_27
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21690..22250
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M4X9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39679.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qs_1_scaffold_2_28
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22298..23092)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z8P8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY81523.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
qs_1_scaffold_2_29
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23095..23631)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W886_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01568.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying items 1-30 of 157 in total

View Taxonomy