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qs_5_scaffold_2554

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_2554_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..117)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN89_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35378.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_5_scaffold_2554_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(358..597)
DNA (240bp) protein (80aa)
moaE; molybdopterin synthase catalytic subunit (EC:2.8.1.12)
Molybdopterin synthase catalytic subunit {ECO:0000313|EMBL:CCQ35377.1}; EC=2.8.1.12 {ECO:0000313|EMBL:CCQ35377.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Molybdopterin synthase catalytic subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK72_NATM8
qs_5_scaffold_2554_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1217..1903
DNA (687bp) protein (229aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF
Uridylate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PYRH_NATPD
qs_5_scaffold_2554_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1896..3533
DNA (1638bp) protein (546aa)
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000255|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00177}; Short=LysRS {ECO:0000255|HAMAP-Rule:MF_00
Lysine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYK_NATPD
qs_5_scaffold_2554_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3587..5356
DNA (1770bp) protein (590aa)
M50 family metalloprotease {ECO:0000313|EMBL:CCQ35374.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCQ35374.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Nat
Probable metalloprotease n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ07_NATM8
probable metalloprotease
qs_5_scaffold_2554_6
unknown

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comp(5384..5614)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_5_scaffold_2554_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5832..7973
DNA (2142bp) protein (714aa)
UPF0447 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN90_NATM8
UPF0447 family protein
Heme-binding protein HemQ {ECO:0000313|EMBL:CCQ35371.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
qs_5_scaffold_2554_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8269..9213)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYQ8_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB59959.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_5_scaffold_2554_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9325..10488)
DNA (1164bp) protein (388aa)
Proteasome-activating nucleotidase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZ25_NATM8
pan1; proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
qs_5_scaffold_2554_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10677..12032)
DNA (1356bp) protein (452aa)
pepF; oligoendopeptidase PepF (EC:3.4.24.-)
Oligoendopeptidase PepF {ECO:0000313|EMBL:CCQ35393.1}; EC=3.4.24.- {ECO:0000313|EMBL:CCQ35393.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Oligoendopeptidase PepF n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNA0_NATM8
qs_5_scaffold_2554_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12292..13119)
DNA (828bp) protein (276aa)
truA; tRNA pseudouridine synthase TruA (EC:5.4.99.12)
tRNA pseudouridine synthase {ECO:0000256|RuleBase:RU003792}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
tRNA pseudouridine synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK75_NATM8
qs_5_scaffold_2554_12
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13133..13402)
DNA (270bp) protein (90aa)
Uncharacterized protein n=4 Tax=Haloferax RepID=D4GZ36_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ93765.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
qs_5_scaffold_2554_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13953..14381)
DNA (429bp) protein (143aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000255|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00127}; Short=HisRS {ECO:0000255|HAMAP-Rul
Histidine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SYH_NATPD
qs_5_scaffold_2554_14
unknown

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14660..14797
DNA (138bp) protein (46aa)

This feature has no annotations

qs_5_scaffold_2554_15
unknown

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14861..15121
DNA (261bp) protein (87aa)

This feature has no annotations

qs_5_scaffold_2554_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15215..15577)
DNA (363bp) protein (121aa)
mannose-6-phosphate isomerase n=1 Tax=Halorubrum sp. T3 RepID=UPI0003626CC5
Uncharacterized protein {ECO:0000313|EMBL:ELZ40710.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
qs_5_scaffold_2554_17
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15761..15964)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40824.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qs_5_scaffold_2554_18
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16812..17093
DNA (282bp) protein (94aa)
Transposase, IS605 OrfB family protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AUS4_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ01693.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannao
transposase, IS605 OrfB family
Displaying 18 items

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