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sw_12_scaffold_1963

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_1963_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..156)
DNA (156bp) protein (52aa)
Molecular chaperone DnaJ n=3 Tax=Halococcus hamelinensis RepID=M0M6T9_9EURY
Molecular chaperone DnaJ {ECO:0000313|EMBL:EMA41507.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
dnaj-class molecular chaperone with c-terminal zn finger domain
sw_12_scaffold_1963_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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266..469
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIU9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23156.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_12_scaffold_1963_3
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(561..1364)
DNA (804bp) protein (268aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1476858 species="Arch
pyrF; orotidine 5-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JAI9_9EURY
sw_12_scaffold_1963_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1504..2163
DNA (660bp) protein (220aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUU6_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EMA49401.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_12_scaffold_1963_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2223..2675)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPK1_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA47632.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_12_scaffold_1963_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2830..3204
DNA (375bp) protein (125aa)
30S ribosomal protein S8e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCG1_9EURY
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
30S ribosomal protein S8e
sw_12_scaffold_1963_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3287..4282)
DNA (996bp) protein (332aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IS11_NATPD
abc14r_1; ABC transporter
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI49079.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_12_scaffold_1963_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4456..5184
DNA (729bp) protein (243aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIW8_9EURY
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
phosphate uptake regulator PhoU
sw_12_scaffold_1963_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5714..7939)
DNA (2226bp) protein (742aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:ACV47894.1}; EC=3.6.4.6 {ECO:0000313|EMBL:ACV47894.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
AAA family ATPase, CDC48 subfamily n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P472_HALMD
sw_12_scaffold_1963_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8127..9479
DNA (1353bp) protein (451aa)
UPF0272 protein C475_16064 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIR4_9EURY
UPF0272 protein C475_16064 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
hypothetical protein
sw_12_scaffold_1963_11

Not on your lists

comp(9525..9821)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y586_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06167.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_12_scaffold_1963_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9985..10173)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5B7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52748.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_1963_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10243..11073)
DNA (831bp) protein (277aa)
Aldo/keto reductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4R1_HALMO
Aldo/keto reductase {ECO:0000313|EMBL:EMA39365.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
aldo/keto reductase
sw_12_scaffold_1963_14
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11209..12027)
DNA (819bp) protein (273aa)
FAD dependent oxidoreductase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PHG2_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EMA69496.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM
FAD dependent oxidoreductase
sw_12_scaffold_1963_15
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12457..13314
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ECH0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44562.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_12_scaffold_1963_16
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13789..14079)
DNA (291bp) protein (97aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HMX8_9EURY
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:ESP89284.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonu
pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
Displaying 16 items

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